Variant report

Variant	rs11626069
Chromosome Location	chr14:39728273-39728274
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs35594444	1.00[AMR][1000 genomes]
rs61998504	1.00[EUR][1000 genomes]
rs61998507	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1053133	chr14:39657535-39770729	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:39703600-39735400	Weak transcription	Pancreas	Pancrea
2	chr14:39704400-39734400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr14:39726200-39733200	Weak transcription	Liver	Liver
4	chr14:39727400-39728600	Enhancers	HepG2	liver
5	chr14:39728000-39728400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr14:39728000-39728400	Strong transcription	Fetal Intestine Large	intestine
7	chr14:39728000-39728600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr14:39728000-39729200	Strong transcription	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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