Variant report

Variant	rs11635624
Chromosome Location	chr15:83315731-83315732
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAZ	chr15:83314805-83317083	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
2	E2F6	chr15:83315572-83317593	H1-hESC	embryonic stem cell:	n/a	chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83315682-83315689 chr15:83316377-83316384
3	MAX	chr15:83315573-83316982	A549	lung:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
4	MAX	chr15:83315290-83316854	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
5	MAX	chr15:83315375-83317625	H1-hESC	embryonic stem cell:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
6	POLR2A	chr15:83314860-83316964	K562	blood:	n/a	n/a
7	CCNT2	chr15:83315005-83317012	K562	blood:	n/a	chr15:83315968-83315977
8	HEY1	chr15:83314783-83315918	K562	blood:	n/a	chr15:83315194-83315209
9	POLR2A	chr15:83314902-83316627	K562	blood:	n/a	n/a
10	E2F6	chr15:83315648-83316822	A549	lung:	n/a	chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83315682-83315689 chr15:83316377-83316384
11	CBX3	chr15:83315656-83316152	K562	blood:	n/a	n/a
12	E2F6	chr15:83315690-83316821	K562	blood:	n/a	chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83316377-83316384
13	MYC	chr15:83315366-83316990	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
14	ELF1	chr15:83315485-83317091	K562	blood:	n/a	chr15:83316355-83316367
15	ZMIZ1	chr15:83315388-83315824	K562	blood:	n/a	n/a
16	MYC	chr15:83314815-83316876	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
17	BHLHE40	chr15:83314933-83316809	K562	blood:	n/a	chr15:83316462-83316471 chr15:83316461-83316474 chr15:83316463-83316472 chr15:83316464-83316473 chr15:83316463-83316472
18	JUND	chr15:83314976-83316804	K562	blood:	n/a	chr15:83316417-83316426 chr15:83315203-83315212 chr15:83316398-83316406
19	UBTF	chr15:83314779-83316748	K562	blood:	n/a	n/a
20	E2F6	chr15:83314939-83317179	K562	blood:	n/a	chr15:83315361-83315375 chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83315682-83315689 chr15:83315358-83315372 chr15:83316377-83316384
21	POLR2A	chr15:83314922-83316843	K562	blood:	n/a	n/a
22	UBTF	chr15:83314909-83316747	K562	blood:	n/a	n/a
23	ZBTB7A	chr15:83314907-83316975	K562	blood:	n/a	n/a
24	E2F4	chr15:83314805-83316795	K562	blood:	n/a	chr15:83315361-83315375 chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83315682-83315689 chr15:83315358-83315372 chr15:83316377-83316384
25	MYC	chr15:83314867-83316920	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
26	MAX	chr15:83314958-83317626	H1-hESC	embryonic stem cell:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
27	MAX	chr15:83315690-83316931	ECC-1	luminal epithelium:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
28	MAX	chr15:83315608-83316774	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
29	CBX3	chr15:83314795-83316810	K562	blood:	n/a	n/a
30	EGR1	chr15:83315667-83316976	K562	blood:	n/a	chr15:83315824-83315838 chr15:83315969-83315982 chr15:83316357-83316370 chr15:83316358-83316367 chr15:83316352-83316374 chr15:83316357-83316367 chr15:83316357-83316370 chr15:83316357-83316370 chr15:83316358-83316368 chr15:83316358-83316368 chr15:83316354-83316368 chr15:83316357-83316370 chr15:83315967-83315977 chr15:83316358-83316369 chr15:83315826-83315837 chr15:83315825-83315838 chr15:83315939-83315952 chr15:83315826-83315837 chr15:83316500-83316513 chr15:83316356-83316370
31	SETDB1	chr15:83315209-83317168	K562	blood:	n/a	n/a
32	POLR2A	chr15:83314899-83317040	K562	blood:	n/a	n/a
33	TEAD4	chr15:83315663-83316567	K562	blood:	n/a	n/a
34	E2F6	chr15:83314918-83317699	H1-hESC	embryonic stem cell:	n/a	chr15:83315361-83315375 chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83315682-83315689 chr15:83315358-83315372 chr15:83316377-83316384
35	MAX	chr15:83315573-83317070	A549	lung:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
36	USF1	chr15:83315706-83316762	K562	blood:	n/a	chr15:83316462-83316471 chr15:83316462-83316473 chr15:83316461-83316474 chr15:83316463-83316472 chr15:83316464-83316473 chr15:83316463-83316472
37	MAX	chr15:83315008-83316823	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
38	TBP	chr15:83314797-83317060	K562	blood:	n/a	n/a
39	E2F6	chr15:83314893-83316922	K562	blood:	n/a	chr15:83315361-83315375 chr15:83316357-83316367 chr15:83315968-83315977 chr15:83315984-83315999 chr15:83315862-83315874 chr15:83315682-83315689 chr15:83315358-83315372 chr15:83316377-83316384
40	HMGN3	chr15:83314985-83317065	K562	blood:	n/a	chr15:83316396-83316405
41	ELF1	chr15:83315718-83316163	K562	blood:	n/a	n/a
42	MAX	chr15:83314596-83317120	K562	blood:	n/a	chr15:83316013-83316022 chr15:83316011-83316019 chr15:83316463-83316472 chr15:83316011-83316024 chr15:83316013-83316022 chr15:83316449-83316458 chr15:83315414-83315425 chr15:83316462-83316473 chr15:83316011-83316024 chr15:83316011-83316024 chr15:83316012-83316023
43	GABPA	chr15:83315487-83316971	K562	blood:	n/a	chr15:83315968-83315977
44	EGR1	chr15:83315633-83316646	K562	blood:	n/a	chr15:83315824-83315838 chr15:83315969-83315982 chr15:83316357-83316370 chr15:83316358-83316367 chr15:83316352-83316374 chr15:83316357-83316367 chr15:83316357-83316370 chr15:83316357-83316370 chr15:83316358-83316368 chr15:83316358-83316368 chr15:83316354-83316368 chr15:83316357-83316370 chr15:83315967-83315977 chr15:83316358-83316369 chr15:83315826-83315837 chr15:83315825-83315838 chr15:83315939-83315952 chr15:83315826-83315837 chr15:83316500-83316513 chr15:83316356-83316370
45	JUN	chr15:83315616-83317196	K562	blood:	n/a	chr15:83316417-83316426 chr15:83316398-83316406

No.	Distal block	Cell Line	Cell type
1	chr15:83315484..83318072-chr15:83348095..83350570,4	MCF-7	breast:
2	chr15:83313668..83318129-chr15:83416864..83421207,8	K562	blood:
3	chr15:83313427..83317808-chr15:83477553..83483000,6	K562	blood:
4	chr15:83314747..83316448-chr15:83680031..83681739,2	K562	blood:
5	chr15:83315715..83320562-chr15:83347753..83351536,6	K562	blood:
6	chr15:83313759..83319278-chr15:83347483..83351536,8	K562	blood:
7	chr15:83314418..83317134-chr15:83417560..83419673,2	MCF-7	breast:
8	chr15:83315603..83319675-chr15:83327659..83331605,4	K562	blood:
9	chr15:83216717..83218665-chr15:83313410..83315739,2	K562	blood:

Variant related genes	Relation type
ENSG00000259462	TF binding region
ENSG00000260608	Chromatin interaction
ENSG00000169609	Chromatin interaction
ENSG00000250988	Chromatin interaction
ENSG00000103723	Chromatin interaction
ENSG00000156232	Chromatin interaction

Extended variants
information (count: 108 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:92)

rs_ID	r²[population]
rs10400906	0.95[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs10468217	0.81[ASN][1000 genomes]
rs10906984	0.91[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.84[ASN][1000 genomes]
rs1145172	0.95[CHB][hapmap];0.84[CHD][hapmap];0.86[JPT][hapmap]
rs1145173	0.95[CHB][hapmap];0.84[CHD][hapmap];0.83[JPT][hapmap]
rs11631963	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11633829	1.00[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11633991	0.84[GIH][hapmap]
rs11637433	0.95[CHB][hapmap];0.87[CHD][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs11855735	0.95[CHB][hapmap];0.82[CHD][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs12148332	0.85[ASN][1000 genomes]
rs12438312	0.84[ASN][1000 genomes]
rs12442686	0.82[ASN][1000 genomes]
rs1259180	0.82[ASN][1000 genomes]
rs1259182	0.85[ASN][1000 genomes]
rs1259183	0.95[CHB][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes]
rs12592022	1.00[YRI][hapmap]
rs1267657	0.95[CHB][hapmap];0.84[CHD][hapmap];0.87[JPT][hapmap]
rs1267658	0.95[CHB][hapmap];0.82[CHD][hapmap];0.82[GIH][hapmap];0.87[JPT][hapmap]
rs1267659	0.95[CHB][hapmap];0.84[CHD][hapmap];0.87[JPT][hapmap]
rs1269134	0.87[ASN][1000 genomes]
rs12911134	0.81[ASN][1000 genomes]
rs12916980	0.95[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs1313492	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1313493	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1367841	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1431717	0.93[GIH][hapmap]
rs1594511	0.95[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs17158390	0.88[ASN][1000 genomes]
rs1864699	0.95[CHB][hapmap];0.87[CHD][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs2099259	0.95[CHB][hapmap];0.87[CHD][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs2278355	0.87[CHB][hapmap];0.84[ASN][1000 genomes]
rs2567635	0.95[CHB][hapmap];0.84[CHD][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs2567636	1.00[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs2678448	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28374463	0.84[ASN][1000 genomes]
rs28415133	0.82[ASN][1000 genomes]
rs28667458	0.81[ASN][1000 genomes]
rs2870965	0.96[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2870966	0.95[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs28808991	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34186444	0.88[ASN][1000 genomes]
rs36109438	0.82[ASN][1000 genomes]
rs3970696	0.95[CHB][hapmap];0.82[CHD][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs4778686	0.95[CHB][hapmap];0.87[CHD][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs4779032	0.95[CHB][hapmap];0.82[CHD][hapmap];0.85[GIH][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs4779039	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4779041	1.00[CEU][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.97[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4779044	0.95[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs4779050	0.91[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.84[ASN][1000 genomes]
rs4779053	0.81[ASN][1000 genomes]
rs55924160	0.88[ASN][1000 genomes]
rs57181760	0.89[ASN][1000 genomes]
rs6603030	0.91[GIH][hapmap]
rs6603033	0.95[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs698500	0.95[CHB][hapmap];0.82[CHD][hapmap];0.87[JPT][hapmap]
rs7165125	0.86[ASN][1000 genomes]
rs7166248	0.81[ASN][1000 genomes]
rs7167880	0.95[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs7171180	0.96[CEU][hapmap];0.95[CHB][hapmap];0.80[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.86[MEX][hapmap];0.87[MKK][hapmap];0.90[TSI][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7178350	0.85[ASN][1000 genomes]
rs7181761	0.95[CHB][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs7182403	0.87[ASN][1000 genomes]
rs7183881	0.87[ASN][1000 genomes]
rs7494860	0.95[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs7496954	0.87[ASN][1000 genomes]
rs783520	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs783521	0.95[CHB][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs783522	0.88[ASN][1000 genomes]
rs783523	0.95[CHB][hapmap];0.82[CHD][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs783525	0.95[CHB][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs783526	0.95[CHB][hapmap];0.84[JPT][hapmap];0.87[ASN][1000 genomes]
rs783527	0.95[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]
rs783529	0.95[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs783530	0.83[ASN][1000 genomes]
rs783531	0.82[ASN][1000 genomes]
rs783532	0.83[ASN][1000 genomes]
rs783533	0.85[ASN][1000 genomes]
rs783534	0.85[ASN][1000 genomes]
rs783535	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs783536	0.84[ASN][1000 genomes]
rs783537	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs783539	0.95[CHB][hapmap];0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs783540	0.95[CHB][hapmap];0.84[CHD][hapmap];0.87[JPT][hapmap];0.84[ASN][1000 genomes]
rs783543	0.95[CHB][hapmap];0.83[JPT][hapmap]
rs783544	0.93[GIH][hapmap]
rs783545	0.81[ASN][1000 genomes]
rs8033106	0.93[GIH][hapmap]
rs803747	0.95[CHB][hapmap];0.87[JPT][hapmap];0.84[ASN][1000 genomes]
rs8040293	0.85[ASN][1000 genomes]
rs8043401	0.95[CHB][hapmap];0.84[CHD][hapmap];0.91[JPT][hapmap];0.85[ASN][1000 genomes]
rs9652567	0.94[CHB][hapmap];0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035899	chr15:83108446-83315731	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1054171	chr15:83237514-83468077	Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
3	nsv1036950	chr15:83245326-83461261	Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
4	nsv1036462	chr15:83245326-83472507	Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
5	esv34318	chr15:83283555-83453495	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
6	nsv1039021	chr15:83283994-83431548	Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
7	esv3344877	chr15:83294946-83316565	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	esv3493740	chr15:83295897-83458896	Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
9	esv3493739	chr15:83296247-83458846	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
10	esv3493738	chr15:83296905-83457854	Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
11	esv3493742	chr15:83296993-83457792	Weak transcription Active TSS Bivalent Enhancer Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
12	nsv817702	chr15:83299461-83457424	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
13	esv1808975	chr15:83307574-83360168	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
14	esv3434026	chr15:83314547-83318195	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
15	esv33057	chr15:83314833-83317588	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
16	esv3360562	chr15:83315522-83318070	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs11635624	FAM154B	cis	parietal	SCAN
rs11635624	GOLGA6L10	cis	Esophagus Mucosa	GTEx
rs11635624	RASGRF1	cis	cerebellum	SCAN
rs11635624	FLJ22795	cis	multi-tissue	Pritchard
rs11635624	LOC653344	cis	multi-tissue	Pritchard
rs11635624	FLJ40113///LOC161527///LOC440295///LOC642346	N/A	lymphoblastoid	RTeQTL
rs11635624	RP13-996F3.5	cis	Esophagus Mucosa	GTEx
rs11635624	CPEB1	cis	parietal	SCAN

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:83314800-83315800	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
2	chr15:83314800-83315800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
3	chr15:83314800-83315800	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
4	chr15:83314800-83315800	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
5	chr15:83314800-83315800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr15:83314800-83317200	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr15:83314800-83317600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
8	chr15:83314800-83317600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr15:83314800-83317800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
10	chr15:83315000-83315800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr15:83315000-83315800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
12	chr15:83315000-83315800	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr15:83315000-83315800	Bivalent Enhancer	HMEC	breast
14	chr15:83315000-83316000	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
15	chr15:83315000-83316000	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
16	chr15:83315000-83316000	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
17	chr15:83315000-83316000	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
18	chr15:83315000-83316000	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
19	chr15:83315000-83316000	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
20	chr15:83315000-83316200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
21	chr15:83315000-83316200	Bivalent Enhancer	Primary hematopoietic stem cells	blood
22	chr15:83315000-83316200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
23	chr15:83315000-83316200	Flanking Active TSS	Pancreas	Pancrea
24	chr15:83315000-83316400	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
25	chr15:83315000-83317200	Active TSS	Brain Substantia Nigra	brain
26	chr15:83315000-83317200	Active TSS	Right Atrium	heart
27	chr15:83315000-83317200	Bivalent/Poised TSS	NHLF	lung
28	chr15:83315000-83317400	Active TSS	Brain Angular Gyrus	brain
29	chr15:83315000-83317400	Bivalent Enhancer	Fetal Brain Male	brain
30	chr15:83315000-83317400	Bivalent Enhancer	Placenta	Placenta
31	chr15:83315000-83318200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
32	chr15:83315200-83315800	Bivalent Enhancer	Fetal Intestine Small	intestine
33	chr15:83315200-83316000	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr15:83315200-83316000	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr15:83315200-83316200	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
36	chr15:83315200-83316200	Bivalent/Poised TSS	Primary mononuclear cells fromperipheralblood	Blood
37	chr15:83315200-83316200	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
38	chr15:83315200-83316200	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
39	chr15:83315200-83316400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
40	chr15:83315200-83316400	Flanking Active TSS	Ovary	ovary
41	chr15:83315200-83317000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
42	chr15:83315200-83317600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr15:83315400-83315800	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr15:83315400-83315800	Bivalent/Poised TSS	Primary T cells from cord blood	blood
45	chr15:83315400-83315800	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
46	chr15:83315400-83315800	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
47	chr15:83315400-83315800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr15:83315400-83315800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
49	chr15:83315400-83315800	Bivalent Enhancer	Left Ventricle	heart
50	chr15:83315400-83316000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell

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