Variant report

Variant rs11641677
Chromosome Location chr16:81271729-81271730
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81270200-81272000 Weak transcription Left Ventricle heart
2 chr16:81270800-81271800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr16:81270800-81271800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
4 chr16:81270800-81271800 Enhancers Duodenum Mucosa Duodenum
5 chr16:81270800-81271800 Enhancers Stomach Smooth Muscle stomach
6 chr16:81270800-81272000 Enhancers Cortex derived primary cultured neurospheres brain
7 chr16:81270800-81273200 Enhancers Fetal Muscle Leg muscle
8 chr16:81271000-81271800 Enhancers ES-I3 Cell Line embryonic stem cell
9 chr16:81271000-81271800 Enhancers HUES48 Cell Line embryonic stem cell
10 chr16:81271000-81271800 Enhancers HUES64 Cell Line embryonic stem cell
11 chr16:81271000-81271800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
12 chr16:81271000-81271800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr16:81271000-81271800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr16:81271000-81271800 Enhancers Brain Hippocampus Middle brain
15 chr16:81271000-81271800 Enhancers Fetal Kidney kidney
16 chr16:81271000-81271800 Enhancers Stomach Mucosa stomach
17 chr16:81271000-81271800 Enhancers NH-A brain
18 chr16:81271000-81271800 Enhancers NHEK skin
19 chr16:81271000-81272000 Enhancers HUES6 Cell Line embryonic stem cell
20 chr16:81271000-81272000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr16:81271000-81272000 Enhancers Liver Liver
22 chr16:81271000-81272000 Enhancers Brain Cingulate Gyrus brain
23 chr16:81271000-81272000 Enhancers Fetal Muscle Trunk muscle
24 chr16:81271000-81272000 Enhancers Skeletal Muscle Female skeletal muscle
25 chr16:81271000-81272000 Enhancers HMEC breast
26 chr16:81271000-81272200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr16:81271000-81272600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr16:81271000-81273000 Enhancers Pancreas Pancrea
29 chr16:81271000-81273600 Enhancers H1 Cell Line embryonic stem cell
30 chr16:81271200-81271800 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr16:81271200-81271800 Enhancers Brain Anterior Caudate brain
32 chr16:81271200-81271800 Enhancers Colon Smooth Muscle Colon
33 chr16:81271200-81271800 Enhancers Rectal Mucosa Donor 29 rectum
34 chr16:81271200-81271800 Enhancers Rectal Mucosa Donor 31 rectum
35 chr16:81271200-81272000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr16:81271200-81272000 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr16:81271200-81272000 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr16:81271200-81272000 Weak transcription Esophagus oesophagus
39 chr16:81271200-81272000 Enhancers Skeletal Muscle Male skeletal muscle
40 chr16:81271200-81272600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr16:81271400-81272000 Enhancers Fetal Lung lung
42 chr16:81271400-81272000 Enhancers Psoas Muscle Psoas
43 chr16:81271400-81272400 Active TSS Rectal Smooth Muscle rectum
44 chr16:81271400-81272600 Flanking Active TSS HepG2 liver
45 chr16:81271400-81273200 Active TSS Duodenum Smooth Muscle Duodenum
46 chr16:81271600-81271800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr16:81271600-81271800 Enhancers Fetal Intestine Small intestine
48 chr16:81271600-81271800 Flanking Active TSS A549 lung
49 chr16:81271600-81272200 Active TSS iPS-20b Cell Line embryonic stem cell
50 chr16:81271600-81272400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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