Variant report

Variant rs1165683
Chromosome Location chr12:104327426-104327427
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104325000-104329200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr12:104325000-104331000 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
3 chr12:104325200-104330000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr12:104325200-104330200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr12:104325400-104327600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr12:104325400-104327600 Weak transcription Gastric stomach
7 chr12:104325600-104327600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr12:104325600-104327600 Genic enhancers Primary B cells from peripheral blood blood
9 chr12:104325600-104327600 Weak transcription Lung lung
10 chr12:104325600-104327600 Weak transcription Pancreas Pancrea
11 chr12:104325600-104327800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr12:104325600-104331000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr12:104325600-104348600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr12:104325600-104349800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr12:104325800-104327800 Genic enhancers Primary B cells from cord blood blood
16 chr12:104325800-104329000 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr12:104325800-104333400 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr12:104325800-104335200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr12:104325800-104348600 Strong transcription Placenta Placenta
20 chr12:104326000-104331000 Genic enhancers Primary T helper naive cells from peripheral blood blood
21 chr12:104326000-104348800 Strong transcription Fetal Muscle Leg muscle
22 chr12:104326200-104330200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
23 chr12:104326200-104330400 Genic enhancers Primary T cells fromperipheralblood blood
24 chr12:104326200-104331200 Transcr. at gene 5' and 3' GM12878-XiMat blood
25 chr12:104326400-104327800 Weak transcription Fetal Brain Male brain
26 chr12:104326400-104329200 Strong transcription Psoas Muscle Psoas
27 chr12:104326400-104330800 Genic enhancers Primary T helper cells fromperipheralblood blood
28 chr12:104326400-104331400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
29 chr12:104326400-104331400 Genic enhancers Primary T killer memory cells from peripheral blood blood
30 chr12:104326600-104327600 Genic enhancers Fetal Brain Female brain
31 chr12:104326600-104328000 Weak transcription Colonic Mucosa Colon
32 chr12:104326600-104328000 Enhancers Fetal Heart heart
33 chr12:104326600-104328400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
34 chr12:104326600-104328400 Genic enhancers Sigmoid Colon Sigmoid Colon
35 chr12:104326600-104329400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr12:104326600-104329600 Genic enhancers Thymus Thymus
37 chr12:104326600-104329800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:104326600-104330000 Genic enhancers Primary T cells from cord blood blood
39 chr12:104326600-104330000 Genic enhancers Brain Cingulate Gyrus brain
40 chr12:104326600-104330200 Genic enhancers Adipose Nuclei Adipose
41 chr12:104326600-104348800 Strong transcription Fetal Muscle Trunk muscle
42 chr12:104326800-104328000 Genic enhancers Primary hematopoietic stem cells short term culture blood
43 chr12:104326800-104328400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr12:104326800-104330000 Genic enhancers Brain Angular Gyrus brain
45 chr12:104326800-104330400 Genic enhancers Left Ventricle heart
46 chr12:104326800-104344800 Strong transcription H9 Cell Line embryonic stem cell
47 chr12:104326800-104348800 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr12:104326800-104348800 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr12:104327000-104327800 Strong transcription ES-I3 Cell Line embryonic stem cell
50 chr12:104327000-104327800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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