The 2.0 version of rSNPBase

Variant report

Variant rs71466293
Chromosome Location chr12:104477741-104477742
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104459200-104480600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:104459200-104480600 Weak transcription Esophagus oesophagus
3 chr12:104459600-104481200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr12:104459800-104477800 Weak transcription Spleen Spleen
5 chr12:104459800-104491800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr12:104460000-104482000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr12:104460000-104496800 Weak transcription HepG2 liver
8 chr12:104460000-104511800 Weak transcription Hela-S3 cervix
9 chr12:104460000-104526200 Weak transcription Colonic Mucosa Colon
10 chr12:104460600-104480600 Weak transcription K562 blood
11 chr12:104461200-104492800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr12:104465200-104480000 Weak transcription A549 lung
13 chr12:104466000-104480600 Weak transcription Stomach Mucosa stomach
14 chr12:104466200-104480400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr12:104469600-104477800 Weak transcription Psoas Muscle Psoas
16 chr12:104470600-104486200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr12:104471000-104499600 Strong transcription Primary monocytes fromperipheralblood blood
18 chr12:104471400-104477800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr12:104471400-104500000 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr12:104472000-104497400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr12:104472200-104478600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr12:104472400-104478800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr12:104472400-104486200 Strong transcription Fetal Muscle Trunk muscle
24 chr12:104472400-104497400 Strong transcription Placenta Placenta
25 chr12:104472400-104501200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr12:104472600-104478400 Strong transcription Primary B cells from cord blood blood
27 chr12:104472600-104480800 Strong transcription Primary T cells from cord blood blood
28 chr12:104472600-104485400 Strong transcription Primary T cells fromperipheralblood blood
29 chr12:104472600-104485800 Strong transcription Dnd41 blood
30 chr12:104472600-104497200 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr12:104472800-104485000 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr12:104473000-104479800 Weak transcription Fetal Intestine Small intestine
33 chr12:104473600-104478800 Strong transcription Primary B cells from peripheral blood blood
34 chr12:104474200-104478600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr12:104474200-104478600 Strong transcription NHLF lung
36 chr12:104474400-104485800 Strong transcription Osteobl bone
37 chr12:104474800-104478400 Strong transcription Fetal Intestine Large intestine
38 chr12:104475000-104478800 Strong transcription Left Ventricle heart
39 chr12:104475000-104485000 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr12:104475400-104478200 Strong transcription Fetal Stomach stomach
41 chr12:104475600-104478800 Strong transcription Fetal Muscle Leg muscle
42 chr12:104475800-104478800 Strong transcription Fetal Thymus thymus
43 chr12:104475800-104489400 Strong transcription Stomach Smooth Muscle stomach
44 chr12:104476000-104478200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr12:104476000-104478800 Strong transcription Primary T helper naive cells fromperipheralblood blood
46 chr12:104476200-104478200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr12:104476200-104478400 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr12:104476200-104478600 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr12:104476200-104478600 Strong transcription Liver Liver
50 chr12:104476200-104478600 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015