Variant report

Variant rs11660567
Chromosome Location chr18:12001258-12001259
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:11982400-12005000 Weak transcription Aorta Aorta
2 chr18:11982600-12028600 Weak transcription Small Intestine intestine
3 chr18:11993400-12016000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr18:11995400-12001800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr18:11995600-12014400 Weak transcription Brain Cingulate Gyrus brain
6 chr18:11996000-12001400 Weak transcription H9 Cell Line embryonic stem cell
7 chr18:11996000-12001400 Weak transcription Rectal Smooth Muscle rectum
8 chr18:11996000-12004000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr18:11996000-12004800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr18:11996000-12004800 Weak transcription HMEC breast
11 chr18:11996000-12005600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr18:11996200-12004800 Weak transcription NHEK skin
13 chr18:11996200-12005200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr18:11996200-12005600 Weak transcription Muscle Satellite Cultured Cells --
15 chr18:11996200-12012200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr18:11996200-12014800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr18:11996200-12015400 Weak transcription Brain Anterior Caudate brain
18 chr18:11996400-12001400 Weak transcription Thymus Thymus
19 chr18:11996400-12002200 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr18:11996400-12004000 Weak transcription Primary B cells from peripheral blood blood
21 chr18:11996400-12005000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr18:11996400-12007800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr18:11996600-12005000 Weak transcription GM12878-XiMat blood
24 chr18:11996600-12035000 Weak transcription Primary T cells from cord blood blood
25 chr18:11996800-12001400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr18:11996800-12017200 Weak transcription Fetal Thymus thymus
27 chr18:11996800-12034400 Weak transcription Primary B cells from cord blood blood
28 chr18:11997000-12004800 Weak transcription Primary hematopoietic stem cells blood
29 chr18:11997000-12034400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr18:11998000-12001400 Enhancers Liver Liver
31 chr18:11998400-12006000 Weak transcription Brain Angular Gyrus brain
32 chr18:11998400-12013200 Weak transcription Right Atrium heart
33 chr18:11998400-12014400 Weak transcription Psoas Muscle Psoas
34 chr18:11998400-12015200 Weak transcription Brain Hippocampus Middle brain
35 chr18:11998400-12034000 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr18:11998600-12002600 Enhancers Stomach Mucosa stomach
37 chr18:11998600-12005000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr18:11998600-12010000 Weak transcription Colon Smooth Muscle Colon
39 chr18:11998800-12001400 Weak transcription Stomach Smooth Muscle stomach
40 chr18:11998800-12005600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr18:11998800-12029400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr18:11999000-12002000 Strong transcription HUES6 Cell Line embryonic stem cell
43 chr18:11999000-12002600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr18:11999000-12002800 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr18:11999000-12006800 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr18:11999000-12017400 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr18:11999000-12019200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr18:11999000-12019400 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr18:11999000-12019400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr18:11999000-12034000 Strong transcription Primary monocytes fromperipheralblood blood

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