Variant report

Variant rs11671000
Chromosome Location chr19:24292827-24292828
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:24270600-24296200 Weak transcription Stomach Mucosa stomach
2 chr19:24271200-24300200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr19:24271400-24295000 Weak transcription HMEC breast
4 chr19:24271400-24301400 Weak transcription HSMMtube muscle
5 chr19:24271400-24308600 Weak transcription K562 blood
6 chr19:24275200-24294000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:24280800-24293800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr19:24281800-24293000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr19:24282200-24293000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr19:24282600-24294000 Strong transcription Cortex derived primary cultured neurospheres brain
11 chr19:24284200-24293600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr19:24284800-24300400 Weak transcription Brain Cingulate Gyrus brain
13 chr19:24285000-24302200 Weak transcription Brain Substantia Nigra brain
14 chr19:24285600-24293800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:24285600-24293800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr19:24285800-24293000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr19:24287400-24293400 Strong transcription Duodenum Smooth Muscle Duodenum
18 chr19:24287800-24293200 Strong transcription Fetal Kidney kidney
19 chr19:24288200-24294000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr19:24288400-24293600 ZNF genes & repeats Primary hematopoietic stem cells blood
21 chr19:24289000-24293000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr19:24289400-24293000 Strong transcription Ovary ovary
23 chr19:24289400-24293600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr19:24289400-24293600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
25 chr19:24289600-24293600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr19:24290400-24293400 Strong transcription Fetal Muscle Leg muscle
27 chr19:24290600-24293400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr19:24290600-24293400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
29 chr19:24290600-24293400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
30 chr19:24290600-24293400 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
31 chr19:24290600-24293400 ZNF genes & repeats Fetal Intestine Small intestine
32 chr19:24290600-24293400 ZNF genes & repeats Lung lung
33 chr19:24290600-24293400 Strong transcription Skeletal Muscle Male skeletal muscle
34 chr19:24290600-24293600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
35 chr19:24290600-24293600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
36 chr19:24290600-24293600 ZNF genes & repeats Dnd41 blood
37 chr19:24290600-24293800 ZNF genes & repeats Liver Liver
38 chr19:24290600-24294000 Strong transcription Left Ventricle heart
39 chr19:24290800-24293400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
40 chr19:24290800-24293600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
41 chr19:24290800-24293600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
42 chr19:24291000-24293600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
43 chr19:24291000-24308600 Weak transcription Hela-S3 cervix
44 chr19:24291200-24293000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr19:24291200-24293200 Weak transcription Spleen Spleen
46 chr19:24291200-24293400 Strong transcription Gastric stomach
47 chr19:24291200-24293600 Strong transcription Primary T killer naive cells fromperipheralblood blood
48 chr19:24291200-24295800 Weak transcription Brain Hippocampus Middle brain
49 chr19:24291200-24299800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr19:24291200-24305800 Weak transcription HUVEC blood vessel

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