Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10165761	0.84[AFR][1000 genomes]
rs10191401	0.82[EUR][1000 genomes]
rs10193810	0.86[AFR][1000 genomes]
rs10194001	0.86[AFR][1000 genomes]
rs10194664	0.82[YRI][hapmap]
rs10195947	0.81[YRI][hapmap]
rs10196069	0.81[YRI][hapmap]
rs10203890	0.82[EUR][1000 genomes]
rs10865363	0.81[EUR][1000 genomes]
rs11126146	0.94[ASN][1000 genomes]
rs11692071	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13403823	0.82[EUR][1000 genomes]
rs13417798	0.84[AFR][1000 genomes]
rs13418956	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs13430868	0.86[AFR][1000 genomes]
rs1430780	0.82[ASN][1000 genomes]
rs1549779	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs1549780	0.86[AFR][1000 genomes]
rs1549781	0.86[AFR][1000 genomes]
rs1978656	0.81[EUR][1000 genomes]
rs1978657	0.84[AFR][1000 genomes]
rs4671197	0.81[ASN][1000 genomes]
rs4671829	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs4671832	0.86[AFR][1000 genomes]
rs4671833	0.86[AFR][1000 genomes]
rs4671834	0.86[AFR][1000 genomes]
rs4671835	0.86[AFR][1000 genomes]
rs4671836	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4671837	0.86[AFR][1000 genomes]
rs4671838	0.84[AFR][1000 genomes]
rs4671841	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs724568	0.81[EUR][1000 genomes]
rs7564895	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
2	nsv1007345	chr2:67870225-67980094	Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv834250	chr2:67897722-68051532	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67915400-67917400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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