Variant report

Variant	rs11675761
Chromosome Location	chr2:172997337-172997338
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:172989427..172991394-chr2:172995614..172998295,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10930516	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11675271	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11675320	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11681688	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11890561	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1319695	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1386354	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16860015	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2357316	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2357317	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4972429	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6433332	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6708019	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6724614	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6735574	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6748154	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6748291	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73020553	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73022510	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73022564	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7566889	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7569224	0.91[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7583008	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7590382	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7590626	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7590815	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7593498	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs972957	0.89[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs991484	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172995800-172999400	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr2:172996400-172997400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
3	chr2:172996400-172998400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr2:172996800-172997400	Enhancers	H9 Cell Line	embryonic stem cell
5	chr2:172996800-172997400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr2:172996800-172997400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr2:172996800-172997600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr2:172996800-172998000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
9	chr2:172996800-172998200	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr2:172996800-172998400	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr2:172997000-172997400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr2:172997000-172997400	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr2:172997000-172997400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr2:172997200-172998200	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr2:172997200-172998400	Enhancers	HUES48 Cell Line	embryonic stem cell

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