Variant report

Variant rs11675946
Chromosome Location chr2:112743033-112743034
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:112713200-112790600 Weak transcription Rectal Smooth Muscle rectum
2 chr2:112718400-112776400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:112721000-112744200 Weak transcription H9 Cell Line embryonic stem cell
4 chr2:112723400-112745000 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr2:112723400-112758400 Weak transcription Dnd41 blood
6 chr2:112723400-112789200 Weak transcription H1 Cell Line embryonic stem cell
7 chr2:112726200-112767600 Weak transcription Fetal Muscle Trunk muscle
8 chr2:112730800-112770400 Weak transcription Brain Angular Gyrus brain
9 chr2:112732600-112771200 Strong transcription Liver Liver
10 chr2:112733200-112744000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr2:112733200-112789200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr2:112735600-112743600 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr2:112737600-112743400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:112738400-112750000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:112739000-112746200 Enhancers Placenta Amnion Placenta Amnion
16 chr2:112739400-112743400 Strong transcription Aorta Aorta
17 chr2:112739400-112746000 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr2:112739400-112746200 Strong transcription HUVEC blood vessel
19 chr2:112739400-112746800 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr2:112739400-112746800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr2:112740400-112743400 Strong transcription Fetal Intestine Small intestine
22 chr2:112740400-112743400 Strong transcription Right Ventricle heart
23 chr2:112740400-112743600 Strong transcription Brain Anterior Caudate brain
24 chr2:112740400-112743600 Strong transcription Fetal Stomach stomach
25 chr2:112740400-112768400 Weak transcription Colonic Mucosa Colon
26 chr2:112740600-112743200 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr2:112741000-112744600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr2:112741000-112746200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr2:112741400-112744600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr2:112741400-112751400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr2:112741400-112751800 Weak transcription Gastric stomach
32 chr2:112741400-112752800 Weak transcription Brain Inferior Temporal Lobe brain
33 chr2:112741400-112777000 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr2:112741400-112777000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr2:112741600-112743200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr2:112741600-112744000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr2:112741600-112761800 Weak transcription Small Intestine intestine
38 chr2:112741800-112745800 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr2:112742000-112743800 Genic enhancers HepG2 liver
40 chr2:112742000-112744200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr2:112742000-112761200 Weak transcription Adipose Nuclei Adipose
42 chr2:112742000-112776800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr2:112742200-112744600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr2:112742200-112745000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr2:112742200-112745000 Weak transcription Spleen Spleen
46 chr2:112742400-112743200 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:112742400-112743600 Weak transcription Brain Substantia Nigra brain
48 chr2:112742400-112751000 Weak transcription Ovary ovary
49 chr2:112742400-112752400 Weak transcription Fetal Lung lung
50 chr2:112742400-112752600 Weak transcription Colon Smooth Muscle Colon

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