Variant report

Variant rs13027171
Chromosome Location chr2:112686988-112686989
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:112664600-112687600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr2:112664600-112702200 Weak transcription Rectal Smooth Muscle rectum
3 chr2:112666400-112692800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:112674600-112687400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:112674800-112687600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr2:112676400-112702200 Weak transcription Colon Smooth Muscle Colon
7 chr2:112677800-112697800 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr2:112678000-112687600 Weak transcription Primary hematopoietic stem cells blood
9 chr2:112678000-112688600 Weak transcription A549 lung
10 chr2:112678000-112690600 Weak transcription Small Intestine intestine
11 chr2:112678000-112691200 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:112678000-112705600 Weak transcription Esophagus oesophagus
13 chr2:112678200-112687600 Weak transcription Adipose Nuclei Adipose
14 chr2:112678800-112689800 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:112682400-112687600 Weak transcription Aorta Aorta
16 chr2:112682400-112687800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr2:112682400-112703200 Weak transcription Placenta Placenta
18 chr2:112683200-112703200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr2:112683400-112698600 Weak transcription H9 Cell Line embryonic stem cell
20 chr2:112684400-112688400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:112684600-112703000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr2:112684800-112687200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr2:112684800-112687600 Weak transcription Spleen Spleen
24 chr2:112684800-112705200 Weak transcription Fetal Muscle Leg muscle
25 chr2:112685000-112687600 Weak transcription Brain Substantia Nigra brain
26 chr2:112685000-112687600 Weak transcription Left Ventricle heart
27 chr2:112685000-112688000 Weak transcription Brain Cingulate Gyrus brain
28 chr2:112685000-112688800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:112685000-112690400 Weak transcription Stomach Mucosa stomach
30 chr2:112685000-112694400 Weak transcription Fetal Muscle Trunk muscle
31 chr2:112685000-112702200 Weak transcription Pancreas Pancrea
32 chr2:112685200-112687800 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr2:112685400-112688000 Weak transcription Brain Hippocampus Middle brain
34 chr2:112685600-112687600 Weak transcription Brain Anterior Caudate brain
35 chr2:112685600-112688200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr2:112685600-112694200 Weak transcription Brain Angular Gyrus brain
37 chr2:112685600-112694600 Weak transcription Right Atrium heart
38 chr2:112685600-112703200 Weak transcription Right Ventricle heart
39 chr2:112686200-112689400 Strong transcription Fetal Intestine Small intestine
40 chr2:112686200-112689600 Strong transcription Stomach Smooth Muscle stomach
41 chr2:112686400-112688200 Strong transcription HUVEC blood vessel
42 chr2:112686400-112689000 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr2:112686400-112693000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:112686600-112687000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr2:112686600-112687000 Strong transcription Fetal Kidney kidney
46 chr2:112686600-112687000 Strong transcription Gastric stomach
47 chr2:112686600-112687000 Strong transcription Placenta Amnion Placenta Amnion
48 chr2:112686600-112688200 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr2:112686600-112688200 Strong transcription Ovary ovary
50 chr2:112686600-112688600 Strong transcription Lung lung

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