The 2.0 version of rSNPBase

Variant report

Variant rs11679115
Chromosome Location chr2:99962159-99962160
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99955000-99964800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:99955000-99965400 Weak transcription Gastric stomach
3 chr2:99955000-99977000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:99955000-99979200 Weak transcription Fetal Stomach stomach
5 chr2:99955000-99979800 Weak transcription Fetal Muscle Trunk muscle
6 chr2:99955200-99974400 Weak transcription Thymus Thymus
7 chr2:99955200-99979600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:99955200-99982600 Weak transcription Fetal Brain Male brain
9 chr2:99955400-99964400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr2:99955400-99970000 Weak transcription NHDF-Ad bronchial
11 chr2:99955400-99976800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:99955400-99979600 Weak transcription Primary hematopoietic stem cells blood
13 chr2:99955400-99979600 Weak transcription NH-A brain
14 chr2:99955600-99964600 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr2:99955600-99978200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:99955800-99976800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:99956000-99963800 Weak transcription Primary T cells from cord blood blood
18 chr2:99956000-99976400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:99956200-99964600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr2:99956200-99970200 Weak transcription Osteobl bone
21 chr2:99956200-99976600 Weak transcription Primary T cells fromperipheralblood blood
22 chr2:99956200-99977600 Weak transcription Fetal Thymus thymus
23 chr2:99956200-100004800 Weak transcription Fetal Heart heart
24 chr2:99956400-99962200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr2:99956400-99964400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr2:99956400-99979600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr2:99956400-99979600 Weak transcription HUVEC blood vessel
28 chr2:99956600-99977200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr2:99956800-99962400 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr2:99956800-99966800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr2:99957000-99964000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr2:99957000-99977200 Weak transcription Dnd41 blood
33 chr2:99957000-99978000 Weak transcription Small Intestine intestine
34 chr2:99957400-99978200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:99957600-99973000 Weak transcription Psoas Muscle Psoas
36 chr2:99957600-99974200 Weak transcription Pancreas Pancrea
37 chr2:99957600-99989400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:99957800-99978200 Weak transcription Hela-S3 cervix
39 chr2:99958000-99963800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr2:99958000-99964800 Weak transcription K562 blood
41 chr2:99958000-99965400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:99958000-99969800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:99958000-99970000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr2:99958000-99978800 Weak transcription Fetal Intestine Small intestine
45 chr2:99958200-99970000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:99958200-99970200 Weak transcription NHEK skin
47 chr2:99958200-99979600 Weak transcription A549 lung
48 chr2:99958600-99964000 Weak transcription GM12878-XiMat blood
49 chr2:99958600-99973200 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr2:99958800-99963600 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015