Variant report

Variant rs1000409
Chromosome Location chr2:100058189-100058190
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:100005800-100062600 Strong transcription Dnd41 blood
2 chr2:100005800-100066000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr2:100006000-100081200 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr2:100021200-100077800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:100022200-100059000 Strong transcription Liver Liver
6 chr2:100032600-100078000 Weak transcription Psoas Muscle Psoas
7 chr2:100034200-100088800 Weak transcription Small Intestine intestine
8 chr2:100036800-100074800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr2:100038200-100063200 Weak transcription Fetal Intestine Small intestine
10 chr2:100038200-100073800 Weak transcription Esophagus oesophagus
11 chr2:100041400-100077800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:100041600-100083400 Weak transcription Brain Substantia Nigra brain
13 chr2:100042800-100065000 Weak transcription Lung lung
14 chr2:100045000-100064200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr2:100045400-100068200 Weak transcription Ovary ovary
16 chr2:100047800-100063200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr2:100048200-100090600 Weak transcription Stomach Mucosa stomach
18 chr2:100048400-100067800 Weak transcription Fetal Heart heart
19 chr2:100048600-100064000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr2:100048600-100068200 Weak transcription Spleen Spleen
21 chr2:100048800-100070400 Weak transcription Fetal Brain Female brain
22 chr2:100050000-100065000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr2:100051800-100064600 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:100052600-100059200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr2:100052800-100059000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr2:100052800-100059000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:100052800-100059200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:100053000-100058400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:100053000-100059600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr2:100053200-100059000 Strong transcription Fetal Intestine Large intestine
31 chr2:100053400-100058200 Strong transcription Primary B cells from cord blood blood
32 chr2:100053400-100059800 Strong transcription Primary monocytes fromperipheralblood blood
33 chr2:100053600-100059200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr2:100053600-100059400 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr2:100053600-100059600 Strong transcription HepG2 liver
36 chr2:100053800-100059200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr2:100053800-100059200 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr2:100053800-100075800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:100054400-100058400 Strong transcription Duodenum Mucosa Duodenum
40 chr2:100054400-100059000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr2:100054400-100059600 Strong transcription Primary T cells fromperipheralblood blood
42 chr2:100054600-100059000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:100054600-100059000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:100054600-100059200 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr2:100054600-100059200 Strong transcription HSMM muscle
46 chr2:100054600-100059600 Strong transcription K562 blood
47 chr2:100054800-100059000 Strong transcription Primary B cells from peripheral blood blood
48 chr2:100054800-100059200 Strong transcription GM12878-XiMat blood
49 chr2:100054800-100059400 Strong transcription Placenta Placenta
50 chr2:100054800-100059800 Strong transcription Primary hematopoietic stem cells short term culture blood

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