Variant report

Variant rs11679343
Chromosome Location chr2:86335208-86335209
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86330800-86335400 Active TSS Psoas Muscle Psoas
2 chr2:86331400-86335400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr2:86333800-86335400 Flanking Active TSS Duodenum Mucosa Duodenum
4 chr2:86334000-86337600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:86334000-86337800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:86334000-86339200 Weak transcription Lung lung
7 chr2:86334200-86335400 Enhancers Primary B cells from peripheral blood blood
8 chr2:86334200-86335400 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr2:86334200-86335600 Transcr. at gene 5' and 3' K562 blood
10 chr2:86334200-86337800 Weak transcription Aorta Aorta
11 chr2:86334200-86342000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr2:86334400-86335400 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
13 chr2:86334400-86335400 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
14 chr2:86334400-86335400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr2:86334400-86335400 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr2:86334400-86335400 Enhancers Adipose Nuclei Adipose
17 chr2:86334400-86335400 Enhancers Brain Angular Gyrus brain
18 chr2:86334400-86335400 Enhancers Brain Substantia Nigra brain
19 chr2:86334400-86335600 Genic enhancers Primary T helper cells fromperipheralblood blood
20 chr2:86334400-86335600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr2:86334400-86335600 Weak transcription Placenta Placenta
22 chr2:86334400-86335800 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr2:86334400-86336600 Weak transcription Fetal Muscle Trunk muscle
24 chr2:86334400-86337600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:86334400-86337600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr2:86334400-86337600 Weak transcription Spleen Spleen
27 chr2:86334400-86337800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr2:86334400-86338000 Weak transcription Gastric stomach
29 chr2:86334400-86339400 Weak transcription Ovary ovary
30 chr2:86334400-86340600 Weak transcription Esophagus oesophagus
31 chr2:86334400-86342000 Weak transcription Pancreas Pancrea
32 chr2:86334400-86362800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr2:86334600-86335400 Enhancers Brain Germinal Matrix brain
34 chr2:86334600-86335400 Transcr. at gene 5' and 3' Dnd41 blood
35 chr2:86334600-86335600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr2:86334600-86335600 Weak transcription Primary monocytes fromperipheralblood blood
37 chr2:86334600-86335800 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr2:86334600-86335800 Genic enhancers Fetal Brain Female brain
39 chr2:86334600-86336000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr2:86334600-86336600 Weak transcription H9 Cell Line embryonic stem cell
41 chr2:86334600-86336600 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr2:86334600-86336600 Weak transcription Fetal Muscle Leg muscle
43 chr2:86334600-86337600 Weak transcription Thymus Thymus
44 chr2:86334600-86339600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr2:86334600-86339800 Weak transcription Colonic Mucosa Colon
46 chr2:86334800-86335400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:86334800-86335400 Enhancers Liver Liver
48 chr2:86334800-86335400 Enhancers Fetal Heart heart
49 chr2:86334800-86335400 Enhancers Fetal Intestine Small intestine
50 chr2:86334800-86335400 Enhancers Pancreatic Islets Pancreatic Islet

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