The 2.0 version of rSNPBase

Variant report

Variant rs60479377
Chromosome Location chr2:86283948-86283949
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86251200-86285000 Strong transcription HUES6 Cell Line embryonic stem cell
2 chr2:86251200-86285200 Strong transcription iPS-20b Cell Line embryonic stem cell
3 chr2:86252000-86331200 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr2:86252200-86285200 Strong transcription HUES48 Cell Line embryonic stem cell
5 chr2:86264000-86332000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr2:86264400-86285400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr2:86264400-86285400 Strong transcription A549 lung
8 chr2:86265200-86284000 Strong transcription NHEK skin
9 chr2:86265200-86330000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr2:86265400-86285200 Strong transcription Fetal Intestine Large intestine
11 chr2:86265400-86289800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:86265400-86289800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr2:86265600-86289800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr2:86265800-86284000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr2:86265800-86305400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:86266000-86287800 Weak transcription Right Atrium heart
17 chr2:86266200-86284600 Strong transcription Sigmoid Colon Sigmoid Colon
18 chr2:86266400-86288800 Strong transcription Duodenum Mucosa Duodenum
19 chr2:86266400-86295800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr2:86266600-86285000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr2:86266800-86289800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr2:86267200-86290800 Strong transcription Primary hematopoietic stem cells short term culture blood
23 chr2:86268800-86284000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:86268800-86291000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr2:86268800-86295000 Strong transcription Dnd41 blood
26 chr2:86269000-86284400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr2:86269800-86289800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:86275200-86289000 Weak transcription Stomach Mucosa stomach
29 chr2:86275800-86290000 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr2:86276400-86290000 Weak transcription Fetal Heart heart
31 chr2:86276400-86291000 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr2:86276800-86291200 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr2:86277000-86286200 Weak transcription Fetal Brain Male brain
34 chr2:86278800-86284000 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr2:86278800-86284400 Genic enhancers Fetal Thymus thymus
36 chr2:86279600-86285200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:86280000-86285000 Strong transcription Primary B cells from cord blood blood
38 chr2:86280200-86293000 Weak transcription Psoas Muscle Psoas
39 chr2:86280800-86284000 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:86280800-86291200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr2:86281200-86288800 Weak transcription Aorta Aorta
42 chr2:86281200-86289400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr2:86281200-86290800 Weak transcription Placenta Amnion Placenta Amnion
44 chr2:86281400-86284000 Weak transcription Muscle Satellite Cultured Cells --
45 chr2:86281400-86284400 Weak transcription HSMMtube muscle
46 chr2:86281400-86285800 Weak transcription HUVEC blood vessel
47 chr2:86281400-86286200 Weak transcription NHLF lung
48 chr2:86281400-86287000 Weak transcription Primary monocytes fromperipheralblood blood
49 chr2:86281400-86287200 Weak transcription Liver Liver
50 chr2:86281400-86287600 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015