Variant report

Variant	rs11701364
Chromosome Location	chr21:39891572-39891573
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs2836444	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2836455	0.85[CEU][hapmap];0.87[TSI][hapmap];0.80[EUR][1000 genomes]
rs2836463	0.82[EUR][1000 genomes]
rs67297531	0.84[EUR][1000 genomes]
rs67417358	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9982370	0.89[JPT][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11701364	KCNJ15	cis	parietal	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39884000-39891800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr21:39891400-39895400	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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