Variant report

Variant	rs2836463
Chromosome Location	chr21:39896191-39896192
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11701364	0.82[EUR][1000 genomes]
rs2212598	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2836455	0.93[CEU][hapmap];0.91[CHB][hapmap];0.84[CHD][hapmap];0.88[TSI][hapmap];0.90[EUR][1000 genomes]
rs2836459	0.81[MEX][hapmap]
rs2836475	0.93[CEU][hapmap];0.95[CHB][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs67297531	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs67417358	0.81[EUR][1000 genomes]
rs8127366	0.82[CHB][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39893600-39896400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr21:39895400-39896200	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr21:39895800-39897200	Weak transcription	Aorta	Aorta
4	chr21:39896000-39896400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr21:39896000-39896600	Flanking Active TSS	HepG2	liver
6	chr21:39896000-39910400	Weak transcription	Small Intestine	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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