Variant report

Variant	rs2836475
Chromosome Location	chr21:39902876-39902877
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1888469	0.81[JPT][hapmap]
rs2212598	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2836455	0.86[CEU][hapmap];0.95[CHB][hapmap];0.81[EUR][1000 genomes]
rs2836463	0.93[CEU][hapmap];0.95[CHB][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2836484	0.82[YRI][hapmap]
rs67297531	0.85[EUR][1000 genomes]
rs67417358	0.81[EUR][1000 genomes]
rs8127366	0.87[CHB][hapmap];0.86[JPT][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39896000-39910400	Weak transcription	Small Intestine	intestine
2	chr21:39897800-39903000	Weak transcription	Aorta	Aorta
3	chr21:39900200-39904400	Weak transcription	HepG2	liver
4	chr21:39902600-39903200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr21:39902800-39903400	Bivalent Enhancer	NHDF-Ad	bronchial
6	chr21:39902800-39904200	Enhancers	Fetal Stomach	stomach
7	chr21:39902800-39904800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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