The 2.0 version of rSNPBase

Variant report

Variant rs11706465
Chromosome Location chr3:69356294-69356295
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69339600-69357200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr3:69343800-69362200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:69344000-69370000 Weak transcription Fetal Brain Male brain
4 chr3:69344000-69370000 Weak transcription Fetal Muscle Leg muscle
5 chr3:69346800-69356800 Weak transcription Thymus Thymus
6 chr3:69347800-69357600 Weak transcription Fetal Stomach stomach
7 chr3:69348000-69356600 Weak transcription Lung lung
8 chr3:69348000-69369400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr3:69349200-69368800 Weak transcription Fetal Brain Female brain
10 chr3:69349600-69356800 Weak transcription Fetal Thymus thymus
11 chr3:69350000-69374200 Weak transcription Aorta Aorta
12 chr3:69350600-69357200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr3:69351600-69356800 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr3:69352000-69356800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr3:69352400-69357000 Weak transcription Dnd41 blood
16 chr3:69353800-69356400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr3:69353800-69357400 Enhancers Brain Anterior Caudate brain
18 chr3:69354600-69356800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:69354600-69357600 Enhancers Brain Inferior Temporal Lobe brain
20 chr3:69355200-69357800 Enhancers Brain Substantia Nigra brain
21 chr3:69355200-69359000 Weak transcription Primary hematopoietic stem cells blood
22 chr3:69355400-69356400 Enhancers Colon Smooth Muscle Colon
23 chr3:69355400-69356400 Enhancers HSMMtube muscle
24 chr3:69355400-69356800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr3:69355400-69357400 Enhancers Brain Cingulate Gyrus brain
26 chr3:69355600-69357600 Enhancers Brain Angular Gyrus brain
27 chr3:69355600-69359400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr3:69355800-69356400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr3:69355800-69356400 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr3:69355800-69356400 Enhancers Spleen Spleen
31 chr3:69355800-69356400 Enhancers Monocytes-CD14+_RO01746 blood
32 chr3:69355800-69361800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr3:69356000-69356400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr3:69356000-69356800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:69356000-69356800 Enhancers Brain Hippocampus Middle brain
36 chr3:69356000-69357000 Weak transcription HMEC breast
37 chr3:69356000-69357200 Enhancers Stomach Smooth Muscle stomach
38 chr3:69356000-69361600 Strong transcription NHEK skin
39 chr3:69356000-69373200 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr3:69356200-69356400 Enhancers Fetal Intestine Small intestine
41 chr3:69356200-69356400 Enhancers Placenta Placenta
42 chr3:69356200-69356400 Enhancers Osteobl bone
43 chr3:69356200-69357200 Weak transcription Primary monocytes fromperipheralblood blood
44 chr3:69356200-69357800 Weak transcription HUVEC blood vessel
45 chr3:69356200-69359000 Weak transcription HSMM muscle
46 chr3:69356200-69368800 Weak transcription Fetal Heart heart
47 chr3:69356200-69369800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015