Variant report

Variant rs11709378
Chromosome Location chr3:121267733-121267734
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:121265600-121271000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:121265800-121267800 Enhancers GM12878-XiMat blood
3 chr3:121265800-121268600 Enhancers Primary monocytes fromperipheralblood blood
4 chr3:121265800-121269200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr3:121265800-121269200 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:121265800-121270600 Weak transcription Fetal Lung lung
7 chr3:121265800-121270800 Weak transcription K562 blood
8 chr3:121265800-121271200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr3:121265800-121271200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:121265800-121271400 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr3:121265800-121280600 Weak transcription H1 Cell Line embryonic stem cell
12 chr3:121266000-121271000 Weak transcription A549 lung
13 chr3:121266000-121271200 Weak transcription Brain Anterior Caudate brain
14 chr3:121266200-121270400 Weak transcription HepG2 liver
15 chr3:121266800-121268400 Enhancers Monocytes-CD14+_RO01746 blood
16 chr3:121267000-121268200 Enhancers Primary B cells from cord blood blood
17 chr3:121267200-121268000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr3:121267200-121268000 Enhancers Duodenum Mucosa Duodenum
19 chr3:121267200-121268000 Enhancers Fetal Intestine Large intestine
20 chr3:121267200-121268000 Enhancers Fetal Intestine Small intestine
21 chr3:121267200-121268000 Enhancers Stomach Mucosa stomach
22 chr3:121267200-121268000 Enhancers HMEC breast
23 chr3:121267200-121268200 Enhancers Rectal Mucosa Donor 31 rectum
24 chr3:121267200-121268400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:121267200-121268400 Enhancers NHEK skin
26 chr3:121267200-121268800 Enhancers Primary B cells from peripheral blood blood
27 chr3:121267400-121268000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:121267400-121268000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr3:121267600-121267800 Flanking Active TSS Rectal Mucosa Donor 29 rectum

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