Variant report

Variant rs11711870
Chromosome Location chr3:195550366-195550367
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195539000-195550800 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr3:195542600-195550600 Weak transcription Placenta Amnion Placenta Amnion
3 chr3:195544800-195550600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr3:195547400-195555600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr3:195548400-195551000 Enhancers Rectal Mucosa Donor 29 rectum
6 chr3:195548800-195550400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr3:195548800-195556400 Weak transcription Pancreas Pancrea
8 chr3:195549000-195550800 Weak transcription Gastric stomach
9 chr3:195549600-195550400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr3:195550200-195550400 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr3:195550200-195550400 Bivalent Enhancer Adipose Nuclei Adipose
12 chr3:195550200-195550400 Enhancers K562 blood
13 chr3:195550200-195550400 Bivalent Enhancer Osteobl bone
14 chr3:195550200-195550600 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:195550200-195550600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr3:195550200-195550600 Bivalent Enhancer Fetal Stomach stomach
17 chr3:195550200-195550600 Enhancers Ovary ovary
18 chr3:195550200-195551000 Bivalent Enhancer Fetal Muscle Trunk muscle
19 chr3:195550200-195551000 Bivalent Enhancer Fetal Muscle Leg muscle
20 chr3:195550200-195551000 Flanking Active TSS Hela-S3 cervix
21 chr3:195550200-195551200 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr3:195550200-195551200 Bivalent Enhancer Duodenum Mucosa Duodenum
23 chr3:195550200-195551200 Enhancers Esophagus oesophagus
24 chr3:195550200-195551200 Bivalent Enhancer NHEK skin

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