Variant report

Variant rs12493867
Chromosome Location chr3:195577905-195577906
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195567000-195578000 Weak transcription Right Atrium heart
2 chr3:195573200-195590000 Weak transcription Thymus Thymus
3 chr3:195574000-195583000 Enhancers Placenta Placenta
4 chr3:195574400-195578000 Weak transcription Osteobl bone
5 chr3:195574600-195578000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr3:195574600-195578000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr3:195574600-195578000 Weak transcription NHDF-Ad bronchial
8 chr3:195574600-195578200 Weak transcription Right Ventricle heart
9 chr3:195574800-195578000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr3:195574800-195578000 Weak transcription HSMM muscle
11 chr3:195575200-195578000 Weak transcription A549 lung
12 chr3:195576000-195578000 Enhancers Skeletal Muscle Female skeletal muscle
13 chr3:195576400-195578000 Weak transcription Ovary ovary
14 chr3:195576400-195578200 Weak transcription Pancreas Pancrea
15 chr3:195576400-195589800 Weak transcription Gastric stomach
16 chr3:195576600-195578000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr3:195576600-195578400 Enhancers Rectal Mucosa Donor 31 rectum
18 chr3:195576600-195581000 Weak transcription Placenta Amnion Placenta Amnion
19 chr3:195576600-195586000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr3:195576800-195578000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:195576800-195578200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr3:195576800-195578200 Weak transcription Esophagus oesophagus
23 chr3:195576800-195578200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:195577600-195578000 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr3:195577600-195578000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr3:195577600-195578000 Enhancers Duodenum Mucosa Duodenum
27 chr3:195577600-195578000 Enhancers Dnd41 blood
28 chr3:195577600-195578000 Enhancers Hela-S3 cervix
29 chr3:195577600-195578000 Bivalent Enhancer HepG2 liver
30 chr3:195577600-195578000 Enhancers K562 blood
31 chr3:195577600-195578200 Enhancers Primary T regulatory cells fromperipheralblood blood
32 chr3:195577600-195578200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr3:195577600-195578200 Enhancers Adipose Nuclei Adipose
34 chr3:195577600-195578200 Bivalent Enhancer Fetal Lung lung
35 chr3:195577600-195578200 Enhancers Rectal Mucosa Donor 29 rectum
36 chr3:195577600-195578200 Active TSS Rectal Smooth Muscle rectum
37 chr3:195577600-195578400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr3:195577600-195578400 Enhancers Primary B cells from peripheral blood blood
39 chr3:195577600-195578400 Bivalent Enhancer Primary T cells fromperipheralblood blood
40 chr3:195577600-195578400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr3:195577600-195578400 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr3:195577600-195578400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr3:195577600-195578400 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr3:195577600-195578400 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr3:195577600-195578400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr3:195577600-195578400 Enhancers Brain Anterior Caudate brain
47 chr3:195577600-195578400 Enhancers Brain Cingulate Gyrus brain
48 chr3:195577600-195578400 Enhancers Brain Substantia Nigra brain
49 chr3:195577600-195578400 Enhancers Fetal Muscle Leg muscle
50 chr3:195577600-195578600 Enhancers HMEC breast

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