The 2.0 version of rSNPBase

Variant report

Variant rs11720745
Chromosome Location chr3:101441690-101441691
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101438200-101442000 Enhancers Primary monocytes fromperipheralblood blood
2 chr3:101439200-101441800 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr3:101439200-101442000 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr3:101439200-101442000 Enhancers Fetal Thymus thymus
5 chr3:101439400-101442000 Enhancers Primary hematopoietic stem cells blood
6 chr3:101439400-101442800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr3:101439800-101441800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr3:101439800-101441800 Enhancers Primary T helper cells fromperipheralblood blood
9 chr3:101439800-101441800 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr3:101440000-101441800 Enhancers Fetal Muscle Leg muscle
11 chr3:101440000-101443000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr3:101440000-101443000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr3:101440400-101442800 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr3:101440400-101443000 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr3:101440600-101441800 Enhancers HepG2 liver
16 chr3:101440600-101442000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr3:101440600-101442800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:101440600-101442800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr3:101440600-101443000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr3:101440600-101443000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr3:101440600-101443000 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr3:101440600-101443000 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr3:101440600-101443000 Weak transcription HSMMtube muscle
24 chr3:101440800-101441800 Enhancers Dnd41 blood
25 chr3:101440800-101442000 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr3:101440800-101442000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr3:101440800-101442600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:101440800-101442600 Weak transcription K562 blood
29 chr3:101440800-101442800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr3:101440800-101443000 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr3:101440800-101443000 Weak transcription Muscle Satellite Cultured Cells --
32 chr3:101440800-101443200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr3:101441000-101441800 Flanking Active TSS Primary B cells from cord blood blood
34 chr3:101441000-101441800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
35 chr3:101441000-101442800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr3:101441000-101442800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr3:101441000-101442800 Weak transcription Psoas Muscle Psoas
38 chr3:101441200-101441800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
39 chr3:101441200-101441800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
40 chr3:101441200-101441800 Flanking Active TSS Thymus Thymus
41 chr3:101441400-101441800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
42 chr3:101441400-101441800 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr3:101441400-101442600 Weak transcription Duodenum Mucosa Duodenum
44 chr3:101441400-101442600 Weak transcription Fetal Muscle Trunk muscle
45 chr3:101441400-101443000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:101441600-101441800 Flanking Active TSS Primary B cells from peripheral blood blood
47 chr3:101441600-101441800 Flanking Active TSS Primary T cells from cord blood blood
48 chr3:101441600-101441800 Enhancers Primary T helper naive cells from peripheral blood blood
49 chr3:101441600-101441800 Enhancers Primary T helper cells PMA-I stimulated --
50 chr3:101441600-101441800 Enhancers Primary T helper 17 cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015