Variant report

Variant	rs11722438
Chromosome Location	chr4:171308892-171308893
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11132848	0.81[AFR][1000 genomes]
rs11727765	0.81[AFR][1000 genomes]
rs12640340	0.81[AFR][1000 genomes]
rs12715911	0.81[AFR][1000 genomes]
rs12715912	0.81[AFR][1000 genomes]
rs13106214	0.87[AFR][1000 genomes]
rs13107828	0.87[AFR][1000 genomes]
rs13124846	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13141317	0.81[AFR][1000 genomes]
rs13149636	0.81[AFR][1000 genomes]
rs13434911	0.81[AFR][1000 genomes]
rs13434915	0.81[AFR][1000 genomes]
rs1406518	0.89[AFR][1000 genomes]
rs1915539	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1919500	0.89[AFR][1000 genomes]
rs1919501	0.89[AFR][1000 genomes]
rs2176964	0.81[AFR][1000 genomes]
rs2176966	0.81[AFR][1000 genomes]
rs2176967	0.81[AFR][1000 genomes]
rs2331912	0.81[AFR][1000 genomes]
rs2331913	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2331914	0.81[AFR][1000 genomes]
rs2331915	0.81[AFR][1000 genomes]
rs2612398	1.00[AMR][1000 genomes]
rs2698226	1.00[AMR][1000 genomes]
rs2877518	0.81[AFR][1000 genomes]
rs4321601	0.81[AFR][1000 genomes]
rs4597785	0.81[AFR][1000 genomes]
rs4692604	0.81[AFR][1000 genomes]
rs4692605	0.81[AFR][1000 genomes]
rs4692828	0.81[AFR][1000 genomes]
rs4692831	0.81[AFR][1000 genomes]
rs6553513	0.81[AFR][1000 genomes]
rs6553517	0.82[AFR][1000 genomes]
rs6553518	0.82[AFR][1000 genomes]
rs6553520	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6815451	0.81[AFR][1000 genomes]
rs6826287	0.81[AFR][1000 genomes]
rs6843666	0.89[AFR][1000 genomes]
rs7655336	0.81[AFR][1000 genomes]
rs7655750	0.81[AFR][1000 genomes]
rs7656816	0.81[AFR][1000 genomes]
rs7665189	0.81[AFR][1000 genomes]
rs7665574	0.81[AFR][1000 genomes]
rs7668801	0.86[AFR][1000 genomes]
rs7684984	0.80[AFR][1000 genomes]
rs7685034	0.86[AFR][1000 genomes]
rs7685794	0.81[AFR][1000 genomes]
rs9684346	0.81[AFR][1000 genomes]

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171308200-171311200	Weak transcription	NHDF-Ad	bronchial
2	chr4:171308200-171311600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr4:171308400-171311200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr4:171308400-171312000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr4:171308600-171309000	Weak transcription	HMEC	breast
6	chr4:171308800-171309200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links