Variant report

Variant	rs11737858
Chromosome Location	chr4:166282529-166282530
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs11100609	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11724658	0.91[ASN][1000 genomes]
rs11724745	0.91[ASN][1000 genomes]
rs11726669	0.91[ASN][1000 genomes]
rs11733533	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs11733588	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs11735751	0.91[ASN][1000 genomes]
rs12108592	0.91[ASN][1000 genomes]
rs1370681	0.91[ASN][1000 genomes]
rs1438111	0.91[ASN][1000 genomes]
rs1438113	1.00[JPT][hapmap]
rs1583645	1.00[JPT][hapmap]
rs16999548	0.91[ASN][1000 genomes]
rs17046348	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs17046358	0.88[ASN][1000 genomes]
rs17046389	1.00[JPT][hapmap]
rs17624818	1.00[JPT][hapmap]
rs4690811	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.88[ASN][1000 genomes]
rs4691185	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs55918500	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs59281346	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs59689502	0.91[ASN][1000 genomes]
rs61164214	0.89[ASN][1000 genomes]
rs6536911	0.91[ASN][1000 genomes]
rs6536912	1.00[JPT][hapmap]
rs6811003	0.87[ASN][1000 genomes]
rs6811043	0.86[JPT][hapmap]
rs6811525	0.91[ASN][1000 genomes]
rs6812711	0.91[ASN][1000 genomes]
rs6825621	0.89[ASN][1000 genomes]
rs6830257	0.91[ASN][1000 genomes]
rs6837095	0.91[ASN][1000 genomes]
rs6843932	0.89[ASN][1000 genomes]
rs6844443	0.91[ASN][1000 genomes]
rs6844574	0.89[ASN][1000 genomes]
rs6844706	0.89[ASN][1000 genomes]
rs6846413	0.91[ASN][1000 genomes]
rs72999774	0.88[ASN][1000 genomes]
rs73862316	0.91[ASN][1000 genomes]
rs7440260	0.91[ASN][1000 genomes]
rs7662293	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs7699257	0.89[ASN][1000 genomes]
rs875485	0.91[ASN][1000 genomes]
rs934813	0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1847399	chr4:166259587-166284836	Strong transcription Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166277600-166285400	Weak transcription	HepG2	liver
2	chr4:166278200-166282800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr4:166280200-166284800	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr4:166281000-166282600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr4:166281600-166285400	Weak transcription	HMEC	breast
6	chr4:166281600-166285800	Weak transcription	Hela-S3	cervix
7	chr4:166281800-166282800	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr4:166281800-166284800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr4:166282400-166282600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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