Variant report

Variant	rs11751696
Chromosome Location	chr6:33433693-33433694
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:33416427..33418165-chr6:33432976..33435399,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1106606	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11753355	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11756267	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11756767	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11759285	0.83[EUR][1000 genomes]
rs2235982	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41267647	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41271245	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4231	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs55699469	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7752202	0.89[EUR][1000 genomes]
rs9277997	0.86[EUR][1000 genomes]
rs9278001	0.87[EUR][1000 genomes]
rs9278005	0.90[EUR][1000 genomes]
rs9278006	0.90[EUR][1000 genomes]
rs9278007	0.90[EUR][1000 genomes]
rs9278015	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs9278016	0.90[EUR][1000 genomes]
rs9278019	0.90[EUR][1000 genomes]
rs9278027	0.88[EUR][1000 genomes]
rs9278028	0.91[EUR][1000 genomes]
rs9278034	0.91[EUR][1000 genomes]
rs9278036	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9278038	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9278039	0.83[EUR][1000 genomes]
rs9278040	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9278043	0.96[EUR][1000 genomes]
rs9278044	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9278045	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9278046	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9278049	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830637	chr6:33329365-33510704	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
2	nsv602832	chr6:33382241-33520221	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33424200-33439200	Weak transcription	Pancreas	Pancrea
2	chr6:33424600-33433800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:33424600-33434400	Weak transcription	Fetal Intestine Small	intestine
4	chr6:33425600-33434400	Weak transcription	Duodenum Mucosa	Duodenum

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