Variant report

Variant	rs11764432
Chromosome Location	chr7:22057137-22057138
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11976853	1.00[ASN][1000 genomes]
rs11976877	1.00[ASN][1000 genomes]
rs11979337	1.00[ASN][1000 genomes]
rs11983758	0.97[EUR][1000 genomes]
rs17146006	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55885547	0.97[EUR][1000 genomes]
rs56928609	1.00[ASN][1000 genomes]
rs57179549	1.00[ASN][1000 genomes]
rs57384443	1.00[ASN][1000 genomes]
rs57862761	1.00[ASN][1000 genomes]
rs60790871	0.97[EUR][1000 genomes]
rs60935590	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6976589	1.00[ASN][1000 genomes]
rs73268775	1.00[ASN][1000 genomes]
rs73270819	1.00[ASN][1000 genomes]
rs73270834	1.00[ASN][1000 genomes]
rs73270856	1.00[ASN][1000 genomes]
rs73270860	1.00[ASN][1000 genomes]
rs73270868	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870325	chr7:21979039-22120493	Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:22048000-22059400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:22054000-22059400	Weak transcription	Fetal Brain Male	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links