The 2.0 version of rSNPBase

Variant report

Variant rs11769546
Chromosome Location chr7:128199822-128199823
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:128172600-128210800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr7:128172600-128214800 Weak transcription Gastric stomach
3 chr7:128172800-128239800 Weak transcription Small Intestine intestine
4 chr7:128173000-128231800 Weak transcription Colonic Mucosa Colon
5 chr7:128173000-128231800 Weak transcription Fetal Kidney kidney
6 chr7:128173600-128201000 Weak transcription Psoas Muscle Psoas
7 chr7:128173600-128214800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr7:128173800-128201000 Weak transcription Brain Germinal Matrix brain
9 chr7:128173800-128214800 Weak transcription Rectal Smooth Muscle rectum
10 chr7:128173800-128234400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr7:128174000-128210600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr7:128174000-128220600 Weak transcription NHLF lung
13 chr7:128174000-128231800 Weak transcription Brain Cingulate Gyrus brain
14 chr7:128174000-128232600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr7:128175400-128231800 Weak transcription Left Ventricle heart
16 chr7:128176000-128214800 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr7:128177600-128231800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr7:128179200-128231800 Weak transcription Esophagus oesophagus
19 chr7:128181800-128231800 Weak transcription Aorta Aorta
20 chr7:128183000-128201000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr7:128183000-128214200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr7:128183400-128214800 Weak transcription HUVEC blood vessel
23 chr7:128183600-128214800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr7:128185000-128210600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr7:128185200-128210000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr7:128187400-128212400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr7:128187400-128214800 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr7:128187400-128214800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr7:128187600-128200200 Weak transcription A549 lung
30 chr7:128187600-128205200 Weak transcription Primary B cells from peripheral blood blood
31 chr7:128187600-128213800 Weak transcription Osteobl bone
32 chr7:128187600-128214400 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr7:128187600-128232000 Weak transcription NH-A brain
34 chr7:128187800-128214800 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr7:128188000-128200400 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr7:128188000-128208800 Weak transcription K562 blood
37 chr7:128188000-128210800 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr7:128188000-128213800 Weak transcription Brain Anterior Caudate brain
39 chr7:128188000-128213800 Weak transcription Brain Hippocampus Middle brain
40 chr7:128188000-128214800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr7:128188000-128214800 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr7:128188000-128215000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr7:128188000-128215000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr7:128188000-128220800 Weak transcription NHEK skin
45 chr7:128188000-128232800 Weak transcription Fetal Brain Female brain
46 chr7:128188200-128215000 Weak transcription Hela-S3 cervix
47 chr7:128188200-128229800 Weak transcription HSMM muscle
48 chr7:128188400-128201200 Weak transcription GM12878-XiMat blood
49 chr7:128188400-128209000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr7:128188400-128210000 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015