The 2.0 version of rSNPBase

Variant report

Variant rs1179461
Chromosome Location chr12:120887517-120887518
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:120884800-120893000 Weak transcription Aorta Aorta
2 chr12:120884800-120893200 Weak transcription Small Intestine intestine
3 chr12:120885000-120893800 Weak transcription Ovary ovary
4 chr12:120885400-120887800 Weak transcription Fetal Kidney kidney
5 chr12:120885400-120892200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr12:120885400-120892200 Weak transcription Left Ventricle heart
7 chr12:120885400-120892600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr12:120885400-120893200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr12:120885400-120893200 Weak transcription Colonic Mucosa Colon
10 chr12:120885400-120893800 Weak transcription Esophagus oesophagus
11 chr12:120885400-120893800 Weak transcription Lung lung
12 chr12:120885400-120894000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:120885400-120895600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr12:120885400-120904400 Strong transcription Fetal Muscle Trunk muscle
15 chr12:120885400-120906000 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr12:120885400-120906000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr12:120885600-120888000 Weak transcription Osteobl bone
18 chr12:120885600-120890000 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr12:120885600-120890000 Weak transcription HMEC breast
20 chr12:120885600-120890400 Weak transcription Fetal Lung lung
21 chr12:120885600-120892600 Weak transcription Adipose Nuclei Adipose
22 chr12:120885600-120893800 Weak transcription HSMMtube muscle
23 chr12:120885600-120894000 Weak transcription Brain Anterior Caudate brain
24 chr12:120885600-120894400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr12:120885600-120896400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr12:120885600-120904000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr12:120885600-120904000 Strong transcription Fetal Stomach stomach
28 chr12:120885800-120887600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr12:120885800-120887600 Enhancers Pancreas Pancrea
30 chr12:120885800-120887600 Weak transcription NHEK skin
31 chr12:120885800-120887800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr12:120885800-120888000 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr12:120885800-120888000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr12:120885800-120888000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr12:120885800-120888000 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr12:120885800-120888000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr12:120885800-120888200 Weak transcription Primary hematopoietic stem cells blood
38 chr12:120885800-120888200 Weak transcription Duodenum Mucosa Duodenum
39 chr12:120885800-120888400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr12:120885800-120888800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr12:120885800-120888800 Strong transcription Fetal Intestine Large intestine
42 chr12:120885800-120889000 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr12:120885800-120889400 Strong transcription iPS-18 Cell Line embryonic stem cell
44 chr12:120885800-120890000 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr12:120885800-120890200 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr12:120885800-120890600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:120885800-120890600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr12:120885800-120890600 Weak transcription Stomach Mucosa stomach
49 chr12:120885800-120890800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr12:120885800-120890800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015