The 2.0 version of rSNPBase

Variant report

Variant rs565266
Chromosome Location chr12:120920087-120920088
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:120908200-120933200 Weak transcription Aorta Aorta
2 chr12:120908400-120925800 Weak transcription Fetal Intestine Small intestine
3 chr12:120908400-120926000 Weak transcription HSMMtube muscle
4 chr12:120908400-120928800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr12:120908400-120929000 Weak transcription Psoas Muscle Psoas
6 chr12:120908400-120932400 Weak transcription H9 Cell Line embryonic stem cell
7 chr12:120908400-120932400 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr12:120908600-120925400 Weak transcription Pancreas Pancrea
9 chr12:120908600-120927200 Weak transcription Fetal Brain Female brain
10 chr12:120908600-120928200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr12:120908600-120928600 Weak transcription Spleen Spleen
12 chr12:120908600-120928800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr12:120908600-120932800 Weak transcription Primary hematopoietic stem cells blood
14 chr12:120908600-120932800 Weak transcription Adipose Nuclei Adipose
15 chr12:120908600-120932800 Weak transcription Brain Germinal Matrix brain
16 chr12:120908600-120932800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr12:120908600-120933000 Weak transcription Thymus Thymus
18 chr12:120908800-120926000 Weak transcription Stomach Smooth Muscle stomach
19 chr12:120908800-120928400 Weak transcription Primary T cells from cord blood blood
20 chr12:120911000-120932800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr12:120912000-120928600 Weak transcription Esophagus oesophagus
22 chr12:120912600-120929200 Weak transcription Fetal Thymus thymus
23 chr12:120912800-120926000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr12:120912800-120928800 Weak transcription Placenta Placenta
25 chr12:120912800-120932600 Weak transcription H1 Cell Line embryonic stem cell
26 chr12:120913000-120927800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr12:120913000-120928600 Weak transcription NHDF-Ad bronchial
28 chr12:120913000-120932600 Weak transcription NH-A brain
29 chr12:120913200-120920600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr12:120913200-120927000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr12:120913200-120928400 Weak transcription NHEK skin
32 chr12:120913200-120932800 Weak transcription HSMM muscle
33 chr12:120913600-120926400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr12:120913600-120926800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr12:120913800-120932400 Weak transcription HMEC breast
36 chr12:120914400-120921200 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr12:120914400-120932600 Weak transcription Placenta Amnion Placenta Amnion
38 chr12:120916400-120920800 Enhancers Primary T cells fromperipheralblood blood
39 chr12:120916400-120932800 Weak transcription Liver Liver
40 chr12:120917400-120920200 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr12:120917600-120921400 Strong transcription Fetal Muscle Leg muscle
42 chr12:120917800-120928200 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr12:120918200-120925400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr12:120918200-120933000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr12:120918400-120925400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr12:120918400-120925400 Weak transcription Brain Angular Gyrus brain
47 chr12:120918400-120925400 Weak transcription Brain Inferior Temporal Lobe brain
48 chr12:120918400-120925600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr12:120918400-120926000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr12:120918400-120928200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015