Variant report
| Variant | rs1179916 |
|---|---|
| Chromosome Location | chr12:66522828-66522829 |
| allele | A/C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:66509000-66523800 | Weak transcription | Pancreas | Pancrea |
| 2 | chr12:66509200-66523600 | Weak transcription | Gastric | stomach |
| 3 | chr12:66513600-66523400 | Weak transcription | Small Intestine | intestine |
| 4 | chr12:66513600-66523800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr12:66514200-66523200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr12:66514400-66523800 | Weak transcription | Spleen | Spleen |
| 7 | chr12:66515600-66523000 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 8 | chr12:66515600-66523600 | Weak transcription | Lung | lung |
| 9 | chr12:66516000-66524000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr12:66516600-66523800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr12:66516800-66523600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 12 | chr12:66516800-66523600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 13 | chr12:66517200-66523400 | Weak transcription | Stomach Mucosa | stomach |
| 14 | chr12:66518400-66523600 | Weak transcription | Right Atrium | heart |
| 15 | chr12:66518600-66523400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 16 | chr12:66518800-66523600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 17 | chr12:66518800-66523600 | Weak transcription | Psoas Muscle | Psoas |
| 18 | chr12:66518800-66523600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 19 | chr12:66519000-66523400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 20 | chr12:66519000-66523600 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr12:66519000-66523600 | Weak transcription | Right Ventricle | heart |
| 22 | chr12:66519000-66523800 | Weak transcription | Aorta | Aorta |
| 23 | chr12:66519400-66523400 | Weak transcription | HSMMtube | muscle |
| 24 | chr12:66519600-66523400 | Weak transcription | Brain Substantia Nigra | brain |
| 25 | chr12:66520000-66523600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 26 | chr12:66520800-66523400 | Weak transcription | Fetal Intestine Small | intestine |
| 27 | chr12:66521000-66523400 | Enhancers | Fetal Heart | heart |
| 28 | chr12:66521200-66523000 | Weak transcription | Brain Hippocampus Middle | brain |
| 29 | chr12:66521400-66523000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 30 | chr12:66521400-66523400 | Weak transcription | Colonic Mucosa | Colon |
| 31 | chr12:66521400-66523800 | Weak transcription | Esophagus | oesophagus |
| 32 | chr12:66521800-66523000 | Weak transcription | NHEK | skin |
| 33 | chr12:66521800-66523400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 34 | chr12:66521800-66523600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 35 | chr12:66522000-66523200 | Weak transcription | Brain Anterior Caudate | brain |
| 36 | chr12:66522000-66523200 | Weak transcription | Fetal Stomach | stomach |
| 37 | chr12:66522000-66523200 | Weak transcription | HUVEC | blood vessel |
| 38 | chr12:66522000-66523400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 39 | chr12:66522000-66523400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 40 | chr12:66522000-66523600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 41 | chr12:66522200-66523400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 42 | chr12:66522200-66523400 | Weak transcription | Brain Angular Gyrus | brain |
| 43 | chr12:66522200-66523400 | Enhancers | HepG2 | liver |
| 44 | chr12:66522400-66523000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 45 | chr12:66522400-66523000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 46 | chr12:66522400-66523000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 47 | chr12:66522400-66523000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 48 | chr12:66522400-66523000 | Weak transcription | Hela-S3 | cervix |
| 49 | chr12:66522400-66523000 | Weak transcription | HMEC | breast |
| 50 | chr12:66522400-66523000 | Weak transcription | K562 | blood |
