The 2.0 version of rSNPBase

Variant report

Variant rs11799699
Chromosome Location chr1:67446686-67446687
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67396800-67458200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:67396800-67459000 Weak transcription Esophagus oesophagus
3 chr1:67397600-67457600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:67400600-67466600 Weak transcription Aorta Aorta
5 chr1:67406400-67455600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:67408200-67448000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:67408200-67450200 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:67409400-67447600 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:67410600-67453200 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr1:67411000-67455000 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr1:67411200-67454800 Strong transcription HUES6 Cell Line embryonic stem cell
12 chr1:67411200-67456200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:67413400-67447000 Strong transcription Primary monocytes fromperipheralblood blood
14 chr1:67413400-67456400 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr1:67414600-67462000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:67417000-67462000 Weak transcription Right Ventricle heart
17 chr1:67418200-67447000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:67420600-67467000 Weak transcription Gastric stomach
19 chr1:67427200-67455200 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr1:67430600-67459000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:67431800-67448200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:67432000-67454000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:67432000-67465600 Weak transcription Pancreas Pancrea
24 chr1:67432000-67468600 Weak transcription Lung lung
25 chr1:67433200-67447600 Weak transcription Fetal Brain Male brain
26 chr1:67433200-67456600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:67434000-67455400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:67435800-67453000 Strong transcription Placenta Placenta
29 chr1:67436400-67453400 Strong transcription HMEC breast
30 chr1:67436600-67457000 Strong transcription NH-A brain
31 chr1:67439200-67456400 Strong transcription Primary neutrophils fromperipheralblood blood
32 chr1:67439800-67456400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:67440000-67452800 Strong transcription Primary B cells from peripheral blood blood
34 chr1:67440000-67453200 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr1:67440200-67447400 Strong transcription Fetal Intestine Large intestine
36 chr1:67440600-67446800 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:67440600-67455800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:67440800-67449000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:67440800-67449200 Strong transcription Fetal Muscle Leg muscle
40 chr1:67440800-67449400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:67441200-67447000 Weak transcription Psoas Muscle Psoas
42 chr1:67441200-67447400 Weak transcription H9 Cell Line embryonic stem cell
43 chr1:67441400-67446800 Weak transcription NHEK skin
44 chr1:67441600-67447000 Weak transcription Ovary ovary
45 chr1:67441600-67447000 Weak transcription Thymus Thymus
46 chr1:67441600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:67442000-67452800 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr1:67442400-67447800 Weak transcription Colonic Mucosa Colon
49 chr1:67443000-67447400 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr1:67443200-67447400 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015