The 2.0 version of rSNPBase

Variant report

Variant rs61587608
Chromosome Location chr1:67467486-67467487
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67432000-67468600 Weak transcription Lung lung
2 chr1:67441600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:67445400-67483800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:67447600-67470200 Strong transcription Rectal Mucosa Donor 29 rectum
5 chr1:67448000-67470800 Weak transcription Brain Angular Gyrus brain
6 chr1:67448800-67468600 Weak transcription HSMMtube muscle
7 chr1:67448800-67470800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:67448800-67484200 Weak transcription Brain Cingulate Gyrus brain
9 chr1:67449400-67501800 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:67449800-67475600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:67450600-67485200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:67450800-67470600 Weak transcription Brain Anterior Caudate brain
13 chr1:67451000-67467600 Weak transcription Brain Hippocampus Middle brain
14 chr1:67451200-67506200 Weak transcription Hela-S3 cervix
15 chr1:67452400-67468400 Weak transcription NHLF lung
16 chr1:67452800-67471200 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr1:67453200-67473200 Weak transcription Colonic Mucosa Colon
18 chr1:67453200-67484000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr1:67454800-67483200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr1:67454800-67484200 Weak transcription NHDF-Ad bronchial
21 chr1:67455000-67484000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr1:67455000-67484200 Weak transcription GM12878-XiMat blood
23 chr1:67455200-67467800 Weak transcription Muscle Satellite Cultured Cells --
24 chr1:67455200-67495000 Weak transcription Small Intestine intestine
25 chr1:67455400-67468800 Weak transcription Primary monocytes fromperipheralblood blood
26 chr1:67455400-67509400 Weak transcription Spleen Spleen
27 chr1:67455600-67468600 Weak transcription Primary T cells fromperipheralblood blood
28 chr1:67455600-67484200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:67455800-67478200 Strong transcription Liver Liver
30 chr1:67455800-67485600 Weak transcription HMEC breast
31 chr1:67456200-67475600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:67456400-67468000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr1:67456400-67484800 Weak transcription HUVEC blood vessel
34 chr1:67458600-67468400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:67460000-67485200 Weak transcription Esophagus oesophagus
36 chr1:67461200-67478600 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr1:67461600-67479200 Strong transcription Fetal Intestine Large intestine
38 chr1:67462000-67468600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:67462000-67474200 Strong transcription Fetal Muscle Trunk muscle
40 chr1:67462000-67478400 Strong transcription Fetal Thymus thymus
41 chr1:67462000-67480400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:67462200-67468400 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr1:67462200-67470800 Weak transcription Brain Substantia Nigra brain
44 chr1:67462200-67484400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:67462400-67484200 Weak transcription Ovary ovary
46 chr1:67462400-67508400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:67462600-67468400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:67462600-67479400 Weak transcription NHEK skin
49 chr1:67462800-67468600 Weak transcription NH-A brain
50 chr1:67463000-67468800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015