Variant report

Variant rs11801296
Chromosome Location chr1:56180667-56180668
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56166400-56182200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:56167800-56181000 Weak transcription HSMM muscle
3 chr1:56170200-56181000 Weak transcription Fetal Muscle Leg muscle
4 chr1:56174000-56186000 Weak transcription Spleen Spleen
5 chr1:56174200-56183000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:56177800-56187800 Enhancers Placenta Placenta
7 chr1:56178400-56181600 Weak transcription Fetal Stomach stomach
8 chr1:56178800-56181800 Weak transcription Fetal Lung lung
9 chr1:56178800-56183400 Weak transcription Fetal Kidney kidney
10 chr1:56179200-56181800 Weak transcription Psoas Muscle Psoas
11 chr1:56179400-56183800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:56179800-56181600 Weak transcription Placenta Amnion Placenta Amnion
13 chr1:56179800-56181800 Weak transcription Colon Smooth Muscle Colon
14 chr1:56179800-56186800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:56180000-56182800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:56180000-56186400 Enhancers NHLF lung
17 chr1:56180000-56190600 Enhancers Muscle Satellite Cultured Cells --
18 chr1:56180400-56186600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:56180400-56186600 Enhancers Osteobl bone
20 chr1:56180600-56181000 Enhancers Liver Liver
21 chr1:56180600-56185000 Enhancers NHDF-Ad bronchial
22 chr1:56180600-56187200 Enhancers Breast Myoepithelial Primary Cells Breast

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