Variant report

Variant rs11805289
Chromosome Location chr1:186377439-186377440
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186345400-186390600 Weak transcription Small Intestine intestine
2 chr1:186345400-186398200 Weak transcription Spleen Spleen
3 chr1:186346200-186380400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:186346200-186388400 Weak transcription Colonic Mucosa Colon
5 chr1:186346400-186388000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:186346400-186390000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:186348000-186382000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:186348600-186390200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:186355600-186379200 Strong transcription K562 blood
10 chr1:186355600-186381800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:186360000-186379200 Weak transcription NHLF lung
12 chr1:186361600-186388400 Weak transcription Brain Cingulate Gyrus brain
13 chr1:186362400-186405600 Weak transcription Brain Angular Gyrus brain
14 chr1:186362800-186378200 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:186362800-186378400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:186362800-186405600 Weak transcription Right Ventricle heart
17 chr1:186363000-186378200 Weak transcription Thymus Thymus
18 chr1:186364600-186381600 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr1:186365400-186390200 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:186365600-186388000 Weak transcription Brain Hippocampus Middle brain
21 chr1:186365600-186395200 Weak transcription Psoas Muscle Psoas
22 chr1:186365800-186388000 Weak transcription Aorta Aorta
23 chr1:186365800-186388000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:186365800-186388000 Weak transcription Rectal Smooth Muscle rectum
25 chr1:186366200-186393800 Weak transcription Lung lung
26 chr1:186366400-186388000 Weak transcription H9 Cell Line embryonic stem cell
27 chr1:186367000-186381000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:186367600-186378400 Weak transcription Ovary ovary
29 chr1:186367600-186390000 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr1:186367800-186387800 Weak transcription Fetal Brain Male brain
31 chr1:186368200-186388000 Weak transcription Brain Substantia Nigra brain
32 chr1:186368600-186378000 Weak transcription Left Ventricle heart
33 chr1:186368600-186398200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:186368800-186387800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr1:186370400-186388200 Weak transcription HSMMtube muscle
36 chr1:186370600-186388000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:186371400-186383000 Strong transcription HSMM muscle
38 chr1:186371600-186381600 Strong transcription Dnd41 blood
39 chr1:186371600-186383000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:186371600-186383200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr1:186371800-186378200 Weak transcription Fetal Intestine Small intestine
42 chr1:186372000-186378600 Weak transcription Fetal Stomach stomach
43 chr1:186372000-186389400 Weak transcription Gastric stomach
44 chr1:186372000-186391000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:186372000-186392000 Weak transcription Esophagus oesophagus
46 chr1:186372000-186398200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:186372000-186406000 Weak transcription Pancreas Pancrea
48 chr1:186373000-186378400 Weak transcription GM12878-XiMat blood
49 chr1:186373200-186383400 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr1:186374000-186378800 Strong transcription Hela-S3 cervix

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