The 2.0 version of rSNPBase

Variant report

Variant rs11808962
Chromosome Location chr1:227363604-227363605
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:227317000-227374200 Weak transcription HepG2 liver
4 chr1:227329600-227380000 Weak transcription Aorta Aorta
5 chr1:227333400-227381000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:227333400-227405600 Weak transcription Adipose Nuclei Adipose
7 chr1:227334800-227371800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:227343200-227400400 Weak transcription A549 lung
9 chr1:227346800-227366600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:227346800-227379800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:227346800-227403800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:227346800-227405800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:227346800-227406800 Weak transcription Fetal Kidney kidney
14 chr1:227347200-227378000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:227347800-227385800 Weak transcription Fetal Intestine Small intestine
16 chr1:227347800-227390400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:227348200-227367600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:227348200-227370200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:227348200-227370400 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:227348200-227371400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:227348200-227376400 Weak transcription Fetal Lung lung
22 chr1:227348200-227377800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:227348200-227377800 Weak transcription HUVEC blood vessel
24 chr1:227348200-227379800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:227348200-227398000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:227348200-227398400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:227348200-227401600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:227348200-227408400 Weak transcription Fetal Muscle Trunk muscle
29 chr1:227348200-227412200 Weak transcription Fetal Muscle Leg muscle
30 chr1:227348400-227378000 Weak transcription Liver Liver
31 chr1:227354800-227374400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:227355000-227374800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:227355400-227379800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:227355400-227386200 Weak transcription Brain Anterior Caudate brain
35 chr1:227357600-227374400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:227358600-227374000 Weak transcription Left Ventricle heart
37 chr1:227358800-227374200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:227359200-227379600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:227359400-227374000 Weak transcription Pancreas Pancrea
40 chr1:227359400-227374400 Weak transcription Brain Hippocampus Middle brain
41 chr1:227359400-227379800 Weak transcription Brain Angular Gyrus brain
42 chr1:227359400-227379800 Weak transcription Brain Cingulate Gyrus brain
43 chr1:227359400-227379800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:227359400-227389000 Weak transcription Right Ventricle heart
45 chr1:227360800-227401200 Weak transcription Hela-S3 cervix
46 chr1:227361200-227374200 Weak transcription Psoas Muscle Psoas
47 chr1:227362600-227370000 Weak transcription NHDF-Ad bronchial
48 chr1:227362800-227377600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:227362800-227377800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:227362800-227379800 Weak transcription NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015