The 2.0 version of rSNPBase

Variant report

Variant rs11811067
Chromosome Location chr1:67205722-67205723
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67157000-67208800 Weak transcription Brain Germinal Matrix brain
2 chr1:67165400-67206800 Weak transcription Fetal Brain Male brain
3 chr1:67188600-67217400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:67192000-67217200 Weak transcription Brain Angular Gyrus brain
5 chr1:67192000-67217400 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:67192200-67208200 Weak transcription Brain Substantia Nigra brain
7 chr1:67196600-67212800 Weak transcription Fetal Brain Female brain
8 chr1:67197000-67217600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:67199600-67206400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:67203000-67206000 Enhancers Primary hematopoietic stem cells blood
11 chr1:67203000-67208600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:67203400-67206400 Weak transcription Stomach Smooth Muscle stomach
13 chr1:67203800-67208000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:67204000-67205800 Enhancers NHDF-Ad bronchial
15 chr1:67204000-67206600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:67204200-67206000 Strong transcription Brain Anterior Caudate brain
17 chr1:67204600-67205800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:67204600-67205800 Strong transcription Aorta Aorta
19 chr1:67204600-67205800 Strong transcription Brain Cingulate Gyrus brain
20 chr1:67204800-67205800 Enhancers Fetal Thymus thymus
21 chr1:67204800-67205800 Enhancers Monocytes-CD14+_RO01746 blood
22 chr1:67205000-67205800 Enhancers Primary monocytes fromperipheralblood blood
23 chr1:67205000-67205800 Enhancers Primary neutrophils fromperipheralblood blood
24 chr1:67205000-67205800 Enhancers Primary T cells from cord blood blood
25 chr1:67205000-67205800 Enhancers Fetal Heart heart
26 chr1:67205000-67205800 Enhancers Dnd41 blood
27 chr1:67205000-67205800 Enhancers K562 blood
28 chr1:67205000-67206000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:67205200-67205800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:67205200-67205800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:67205400-67205800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:67205400-67205800 Enhancers Adipose Nuclei Adipose
33 chr1:67205400-67205800 Enhancers Duodenum Mucosa Duodenum
34 chr1:67205400-67205800 Weak transcription Lung lung
35 chr1:67205400-67205800 Enhancers Skeletal Muscle Male skeletal muscle
36 chr1:67205400-67217600 Weak transcription Brain Hippocampus Middle brain
37 chr1:67205600-67205800 Enhancers NHLF lung
38 chr1:67205600-67206000 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:67205600-67211600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:67205600-67217600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015