The 2.0 version of rSNPBase

Variant report

Variant rs6679379
Chromosome Location chr1:67199156-67199157
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67157000-67208800 Weak transcription Brain Germinal Matrix brain
2 chr1:67165400-67206800 Weak transcription Fetal Brain Male brain
3 chr1:67184800-67199400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:67186400-67205000 Weak transcription Fetal Heart heart
5 chr1:67188600-67217400 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:67190200-67201200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:67191800-67204600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:67191800-67204800 Weak transcription Lung lung
9 chr1:67192000-67204600 Weak transcription Aorta Aorta
10 chr1:67192000-67204800 Weak transcription Left Ventricle heart
11 chr1:67192000-67217200 Weak transcription Brain Angular Gyrus brain
12 chr1:67192000-67217400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:67192200-67204600 Weak transcription Brain Hippocampus Middle brain
14 chr1:67192200-67208200 Weak transcription Brain Substantia Nigra brain
15 chr1:67192400-67204200 Weak transcription Brain Anterior Caudate brain
16 chr1:67193000-67199600 Enhancers Primary hematopoietic stem cells blood
17 chr1:67193800-67199600 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr1:67195400-67199800 Enhancers Dnd41 blood
19 chr1:67196600-67212800 Weak transcription Fetal Brain Female brain
20 chr1:67196800-67199800 Enhancers Muscle Satellite Cultured Cells --
21 chr1:67197000-67201200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:67197000-67217600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:67197200-67199200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:67197200-67199600 Enhancers Primary neutrophils fromperipheralblood blood
25 chr1:67197400-67199800 Enhancers Osteobl bone
26 chr1:67197600-67204600 Weak transcription Brain Cingulate Gyrus brain
27 chr1:67197800-67199600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:67197800-67199600 Enhancers HUVEC blood vessel
29 chr1:67198000-67199400 Enhancers Primary monocytes fromperipheralblood blood
30 chr1:67198000-67199600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:67198000-67199600 Enhancers Monocytes-CD14+_RO01746 blood
32 chr1:67198000-67199600 Enhancers NHLF lung
33 chr1:67198200-67199400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:67198200-67203800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:67198400-67199200 Genic enhancers NHDF-Ad bronchial
36 chr1:67198400-67199800 Enhancers NHEK skin
37 chr1:67198400-67200000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:67198600-67199200 Enhancers Fetal Lung lung
39 chr1:67198600-67199600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:67198800-67199200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:67199000-67199400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015