The 2.0 version of rSNPBase

Variant report

Variant rs11823553
Chromosome Location chr11:94336499-94336500
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94296600-94344800 Weak transcription Left Ventricle heart
2 chr11:94308200-94342800 Weak transcription K562 blood
3 chr11:94309200-94342600 Weak transcription Primary hematopoietic stem cells blood
4 chr11:94321000-94344800 Weak transcription Lung lung
5 chr11:94321400-94342600 Weak transcription Fetal Brain Female brain
6 chr11:94322200-94343600 Weak transcription Psoas Muscle Psoas
7 chr11:94322600-94341600 Weak transcription Right Ventricle heart
8 chr11:94322800-94340800 Weak transcription Colonic Mucosa Colon
9 chr11:94323000-94341000 Weak transcription Gastric stomach
10 chr11:94323600-94351800 Weak transcription Rectal Smooth Muscle rectum
11 chr11:94324600-94343600 Weak transcription Spleen Spleen
12 chr11:94324800-94341000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr11:94325000-94341000 Weak transcription Ovary ovary
14 chr11:94325000-94344400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr11:94325200-94357600 Weak transcription Placenta Amnion Placenta Amnion
16 chr11:94326400-94338400 Weak transcription NHDF-Ad bronchial
17 chr11:94326400-94342400 Weak transcription Brain Inferior Temporal Lobe brain
18 chr11:94329000-94341000 Weak transcription Fetal Muscle Leg muscle
19 chr11:94329200-94343000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr11:94329400-94342200 Weak transcription Primary T cells from cord blood blood
21 chr11:94330200-94341000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr11:94332600-94342400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:94333000-94343200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr11:94333000-94346200 Weak transcription Stomach Smooth Muscle stomach
25 chr11:94333200-94338400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr11:94333200-94341000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr11:94333200-94343000 Weak transcription Brain Cingulate Gyrus brain
28 chr11:94333400-94337800 Weak transcription Adipose Nuclei Adipose
29 chr11:94333400-94341000 Weak transcription Aorta Aorta
30 chr11:94333400-94341000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr11:94333800-94340800 Weak transcription Fetal Stomach stomach
32 chr11:94335000-94337000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:94335000-94337200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr11:94335200-94336800 Enhancers Primary neutrophils fromperipheralblood blood
35 chr11:94335600-94336600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr11:94335800-94336600 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr11:94335800-94338800 Enhancers ES-WA7 Cell Line embryonic stem cell
38 chr11:94336000-94336600 Active TSS A549 lung
39 chr11:94336000-94336600 Flanking Active TSS Hela-S3 cervix
40 chr11:94336000-94336600 Enhancers NH-A brain
41 chr11:94336000-94336800 Enhancers HUES6 Cell Line embryonic stem cell
42 chr11:94336000-94336800 Enhancers Primary B cells from peripheral blood blood
43 chr11:94336000-94337400 Enhancers Fetal Intestine Large intestine
44 chr11:94336000-94338000 Enhancers Fetal Intestine Small intestine
45 chr11:94336000-94338600 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr11:94336200-94336600 Enhancers Cortex derived primary cultured neurospheres brain
47 chr11:94336200-94336600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr11:94336200-94336600 Enhancers Fetal Kidney kidney
49 chr11:94336200-94336600 Enhancers Pancreas Pancrea
50 chr11:94336200-94336800 Enhancers HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015