Variant report

Variant	rs11824608
Chromosome Location	chr11:68479997-68479998
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:68451640..68453634-chr11:68479035..68481947,2	MCF-7	breast:
2	chr11:68478674..68481109-chr11:68482684..68484970,2	MCF-7	breast:
3	chr11:68450636..68452249-chr11:68477399..68480114,2	K562	blood:

Variant related genes	Relation type
ENSG00000069482	Chromatin interaction
ENSG00000132749	Chromatin interaction

rs_ID	r²[population]
rs11820301	1.00[AMR][1000 genomes]
rs11820323	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11822789	1.00[AMR][1000 genomes]
rs11826997	1.00[AMR][1000 genomes]
rs11827064	1.00[AMR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:68472800-68481600	Weak transcription	Gastric	stomach
2	chr11:68473000-68481400	Weak transcription	Ovary	ovary
3	chr11:68473200-68504600	Weak transcription	Pancreas	Pancrea
4	chr11:68473400-68486600	Weak transcription	Fetal Intestine Small	intestine
5	chr11:68474800-68486600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr11:68474800-68493400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:68475800-68480200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr11:68475800-68482600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr11:68476800-68480000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr11:68477000-68501400	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr11:68477200-68487200	Weak transcription	Primary hematopoietic stem cells	blood
12	chr11:68477400-68480400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr11:68477600-68481600	Weak transcription	Spleen	Spleen
14	chr11:68478000-68480400	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr11:68478200-68482200	Strong transcription	Primary neutrophils fromperipheralblood	blood
16	chr11:68478400-68481800	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr11:68478600-68482600	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr11:68478600-68482800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr11:68478800-68482200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr11:68479000-68481400	Weak transcription	Fetal Kidney	kidney
21	chr11:68479200-68481800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr11:68479600-68480000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr11:68479800-68480400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr11:68479800-68480400	Weak transcription	H9 Cell Line	embryonic stem cell

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