Variant report

Variant rs11826941
Chromosome Location chr11:59352449-59352450
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59334200-59366200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr11:59334200-59382000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr11:59340800-59378200 Strong transcription Fetal Thymus thymus
4 chr11:59342000-59352600 Strong transcription Primary T helper naive cells fromperipheralblood blood
5 chr11:59342000-59379000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr11:59342200-59358000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr11:59342200-59378200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
8 chr11:59343400-59352600 Strong transcription Skeletal Muscle Female skeletal muscle
9 chr11:59343600-59378400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr11:59343800-59382000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr11:59344000-59360400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:59346200-59360400 Weak transcription Esophagus oesophagus
13 chr11:59346200-59360400 Weak transcription Right Ventricle heart
14 chr11:59346200-59361000 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr11:59346600-59360400 Weak transcription H9 Cell Line embryonic stem cell
16 chr11:59346800-59354200 Weak transcription Small Intestine intestine
17 chr11:59347200-59352600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr11:59347600-59352800 Strong transcription Primary T cells from cord blood blood
19 chr11:59347600-59359800 Weak transcription Spleen Spleen
20 chr11:59348200-59355000 Weak transcription Brain Substantia Nigra brain
21 chr11:59348400-59354600 Weak transcription Ovary ovary
22 chr11:59349000-59354000 Weak transcription Rectal Smooth Muscle rectum
23 chr11:59349000-59357600 Weak transcription HUVEC blood vessel
24 chr11:59349000-59359400 Weak transcription Brain Angular Gyrus brain
25 chr11:59350000-59360400 Weak transcription Gastric stomach
26 chr11:59350200-59353000 Weak transcription Left Ventricle heart
27 chr11:59350200-59354200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr11:59350200-59355800 Weak transcription Aorta Aorta
29 chr11:59350200-59360800 Weak transcription Stomach Mucosa stomach
30 chr11:59350200-59361000 Weak transcription Psoas Muscle Psoas
31 chr11:59350200-59378200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr11:59350400-59360600 Weak transcription NHLF lung
33 chr11:59350600-59354200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr11:59351000-59352600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
35 chr11:59351200-59354800 Strong transcription Lung lung
36 chr11:59351400-59352600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr11:59351400-59352600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr11:59351400-59352600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
39 chr11:59351400-59352600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:59351400-59352600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
41 chr11:59351400-59352600 ZNF genes & repeats Fetal Intestine Small intestine
42 chr11:59351400-59353000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
43 chr11:59351400-59354600 Strong transcription Brain Hippocampus Middle brain
44 chr11:59351400-59371400 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr11:59351600-59352600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
46 chr11:59351600-59352600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
47 chr11:59351600-59352600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr11:59351600-59352600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr11:59351600-59352600 Strong transcription Duodenum Smooth Muscle Duodenum
50 chr11:59351600-59352600 ZNF genes & repeats Fetal Brain Female brain

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