Variant report
| Variant | rs11835001 |
|---|---|
| Chromosome Location | chr12:59266984-59266985 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59253000-59270200 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr12:59254600-59268600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr12:59254800-59267000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 4 | chr12:59255000-59267400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 5 | chr12:59255400-59267000 | Weak transcription | Pancreas | Pancrea |
| 6 | chr12:59257000-59270800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr12:59258000-59267000 | Weak transcription | Gastric | stomach |
| 8 | chr12:59258000-59267200 | Weak transcription | Aorta | Aorta |
| 9 | chr12:59258600-59267000 | Weak transcription | Lung | lung |
| 10 | chr12:59258800-59267400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 11 | chr12:59259200-59270200 | Strong transcription | HMEC | breast |
| 12 | chr12:59259800-59267200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr12:59260000-59267400 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr12:59260400-59267000 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr12:59260400-59267200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr12:59260400-59267200 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr12:59260400-59270200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 18 | chr12:59260600-59284200 | Strong transcription | HUVEC | blood vessel |
| 19 | chr12:59260800-59267600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 20 | chr12:59261400-59267600 | Strong transcription | NH-A | brain |
| 21 | chr12:59261400-59270800 | Strong transcription | Liver | Liver |
| 22 | chr12:59261400-59284200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 23 | chr12:59261600-59284200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 24 | chr12:59261800-59270200 | Strong transcription | HSMM | muscle |
| 25 | chr12:59261800-59275000 | Strong transcription | Fetal Lung | lung |
| 26 | chr12:59261800-59280800 | Strong transcription | Fetal Intestine Large | intestine |
| 27 | chr12:59262600-59267400 | Weak transcription | HSMMtube | muscle |
| 28 | chr12:59262600-59268400 | Weak transcription | Hela-S3 | cervix |
| 29 | chr12:59262600-59269000 | Weak transcription | Stomach Mucosa | stomach |
| 30 | chr12:59262600-59272400 | Weak transcription | Fetal Heart | heart |
| 31 | chr12:59262600-59295000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 32 | chr12:59262800-59267200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 33 | chr12:59262800-59268600 | Weak transcription | Spleen | Spleen |
| 34 | chr12:59263000-59276400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr12:59263200-59267200 | Weak transcription | Brain Anterior Caudate | brain |
| 36 | chr12:59263200-59270400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr12:59263200-59277000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 38 | chr12:59263400-59267800 | Weak transcription | Small Intestine | intestine |
| 39 | chr12:59263400-59270600 | Strong transcription | A549 | lung |
| 40 | chr12:59263400-59271200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 41 | chr12:59263400-59281400 | Strong transcription | NHEK | skin |
| 42 | chr12:59263600-59267200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 43 | chr12:59263600-59278800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 44 | chr12:59263800-59267200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 45 | chr12:59264200-59274800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 46 | chr12:59264400-59268600 | Weak transcription | HepG2 | liver |
| 47 | chr12:59264400-59274600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 48 | chr12:59264800-59268200 | Weak transcription | Fetal Brain Female | brain |
| 49 | chr12:59264800-59268600 | Weak transcription | Brain Angular Gyrus | brain |
| 50 | chr12:59264800-59284200 | Strong transcription | Duodenum Mucosa | Duodenum |
