Variant report
| Variant | rs17121641 |
|---|---|
| Chromosome Location | chr12:59268729-59268730 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59253000-59270200 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr12:59257000-59270800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr12:59259200-59270200 | Strong transcription | HMEC | breast |
| 4 | chr12:59260400-59270200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr12:59260600-59284200 | Strong transcription | HUVEC | blood vessel |
| 6 | chr12:59261400-59270800 | Strong transcription | Liver | Liver |
| 7 | chr12:59261400-59284200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 8 | chr12:59261600-59284200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 9 | chr12:59261800-59270200 | Strong transcription | HSMM | muscle |
| 10 | chr12:59261800-59275000 | Strong transcription | Fetal Lung | lung |
| 11 | chr12:59261800-59280800 | Strong transcription | Fetal Intestine Large | intestine |
| 12 | chr12:59262600-59269000 | Weak transcription | Stomach Mucosa | stomach |
| 13 | chr12:59262600-59272400 | Weak transcription | Fetal Heart | heart |
| 14 | chr12:59262600-59295000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 15 | chr12:59263000-59276400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 16 | chr12:59263200-59270400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 17 | chr12:59263200-59277000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 18 | chr12:59263400-59270600 | Strong transcription | A549 | lung |
| 19 | chr12:59263400-59271200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 20 | chr12:59263400-59281400 | Strong transcription | NHEK | skin |
| 21 | chr12:59263600-59278800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr12:59264200-59274800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 23 | chr12:59264400-59274600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 24 | chr12:59264800-59284200 | Strong transcription | Duodenum Mucosa | Duodenum |
| 25 | chr12:59265000-59277200 | Weak transcription | GM12878-XiMat | blood |
| 26 | chr12:59265200-59271000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 27 | chr12:59265400-59269400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 28 | chr12:59265400-59275400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 29 | chr12:59265400-59284200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 30 | chr12:59265600-59271200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 31 | chr12:59265600-59276200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 32 | chr12:59265800-59270800 | Strong transcription | NHLF | lung |
| 33 | chr12:59265800-59275800 | Strong transcription | Fetal Kidney | kidney |
| 34 | chr12:59266000-59268800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 35 | chr12:59266000-59282000 | Strong transcription | Adipose Nuclei | Adipose |
| 36 | chr12:59266000-59311000 | Weak transcription | Fetal Thymus | thymus |
| 37 | chr12:59266200-59270600 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr12:59266200-59274800 | Strong transcription | Colon Smooth Muscle | Colon |
| 39 | chr12:59266200-59278600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 40 | chr12:59266200-59284000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 41 | chr12:59266400-59268800 | Strong transcription | Brain Cingulate Gyrus | brain |
| 42 | chr12:59266400-59269000 | Strong transcription | Esophagus | oesophagus |
| 43 | chr12:59266400-59269600 | Strong transcription | Colonic Mucosa | Colon |
| 44 | chr12:59266400-59270800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 45 | chr12:59266400-59274800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 46 | chr12:59266400-59274800 | Strong transcription | Right Ventricle | heart |
| 47 | chr12:59266400-59274800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 48 | chr12:59266400-59274800 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 49 | chr12:59266400-59275000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 50 | chr12:59266400-59275400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
