Variant report
| Variant | rs11835930 |
|---|---|
| Chromosome Location | chr12:64492954-64492955 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:64457000-64510600 | Weak transcription | HepG2 | liver |
| 2 | chr12:64474800-64521400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr12:64477400-64520800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 4 | chr12:64482600-64497600 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr12:64482800-64493000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 6 | chr12:64482800-64503400 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr12:64483000-64521400 | Weak transcription | Liver | Liver |
| 8 | chr12:64483200-64498200 | Weak transcription | Ovary | ovary |
| 9 | chr12:64483200-64502400 | Weak transcription | Aorta | Aorta |
| 10 | chr12:64483200-64502400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr12:64483200-64503400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 12 | chr12:64483200-64520800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 13 | chr12:64483200-64521400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 14 | chr12:64483400-64495600 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 15 | chr12:64483400-64503600 | Weak transcription | Right Ventricle | heart |
| 16 | chr12:64483400-64505400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 17 | chr12:64483600-64503600 | Weak transcription | Pancreas | Pancrea |
| 18 | chr12:64483600-64519800 | Weak transcription | Gastric | stomach |
| 19 | chr12:64483600-64521400 | Weak transcription | Lung | lung |
| 20 | chr12:64484000-64493200 | Weak transcription | Hela-S3 | cervix |
| 21 | chr12:64485400-64502800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 22 | chr12:64486600-64504200 | Weak transcription | Fetal Heart | heart |
| 23 | chr12:64487000-64493000 | Weak transcription | Fetal Lung | lung |
| 24 | chr12:64487400-64526600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 25 | chr12:64489000-64506400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 26 | chr12:64490400-64498600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 27 | chr12:64490600-64496600 | Genic enhancers | NHDF-Ad | bronchial |
| 28 | chr12:64491000-64493600 | Enhancers | Fetal Muscle Leg | muscle |
| 29 | chr12:64491000-64493800 | Enhancers | HSMM | muscle |
| 30 | chr12:64491200-64493200 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 31 | chr12:64491200-64493600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 32 | chr12:64491200-64494000 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 33 | chr12:64491200-64494200 | Genic enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 34 | chr12:64491200-64494400 | Strong transcription | Fetal Brain Female | brain |
| 35 | chr12:64491400-64493000 | Enhancers | NHLF | lung |
| 36 | chr12:64491400-64493400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 37 | chr12:64491400-64493800 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 38 | chr12:64491400-64494600 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 39 | chr12:64491600-64493000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 40 | chr12:64491600-64493200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr12:64491600-64494400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr12:64491800-64523600 | Weak transcription | HUVEC | blood vessel |
| 43 | chr12:64492200-64493000 | Enhancers | Osteobl | bone |
| 44 | chr12:64492200-64494000 | Enhancers | Psoas Muscle | Psoas |
| 45 | chr12:64492200-64495600 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 46 | chr12:64492400-64493000 | Enhancers | Colon Smooth Muscle | Colon |
| 47 | chr12:64492400-64493400 | Enhancers | Left Ventricle | heart |
| 48 | chr12:64492400-64493600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 49 | chr12:64492400-64494200 | Strong transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 50 | chr12:64492400-64494400 | Genic enhancers | HMEC | breast |
