Variant report

Variant	rs11837295
Chromosome Location	chr12:103969527-103969528
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:103967859..103969878-chr12:103972890..103976070,3	K562	blood:
2	chr12:103968812..103969756-chr12:104025690..104026992,7	K562	blood:
3	chr12:103276671..103277625-chr12:103968865..103969543,2	MCF-7	breast:
4	chr12:103968788..103969666-chr12:104278125..104278702,2	MCF-7	breast:
5	chr12:103964010..103966292-chr12:103967162..103970095,2	MCF-7	breast:
6	chr12:103968730..103969710-chr12:104025919..104027004,17	MCF-7	breast:
7	chr12:103968837..103969670-chr12:104026108..104026999,6	MCF-7	breast:
8	chr12:103969311..103971113-chr12:103972215..103974631,2	MCF-7	breast:

No data

rs_ID	r²[population]
rs10450733	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1104981	0.94[AFR][1000 genomes]
rs11833672	1.00[EUR][1000 genomes]
rs11833714	1.00[EUR][1000 genomes]
rs11838301	1.00[EUR][1000 genomes]
rs59578983	0.90[AFR][1000 genomes]
rs73391981	0.90[AFR][1000 genomes]
rs7969095	0.97[AFR][1000 genomes]

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103968600-103969600	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr12:103968600-103969800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr12:103968800-103969600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
4	chr12:103968800-103969600	Enhancers	Spleen	Spleen
5	chr12:103968800-103969800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr12:103969000-103969600	Enhancers	H9 Cell Line	embryonic stem cell
7	chr12:103969000-103969600	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
8	chr12:103969000-103969600	Active TSS	Brain Hippocampus Middle	brain
9	chr12:103969000-103969600	Enhancers	Brain Substantia Nigra	brain
10	chr12:103969000-103969600	Active TSS	Stomach Smooth Muscle	stomach
11	chr12:103969000-103969800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr12:103969000-103969800	Active TSS	Colon Smooth Muscle	Colon
13	chr12:103969000-103969800	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr12:103969200-103969600	Active TSS	ES-I3 Cell Line	embryonic stem cell
15	chr12:103969200-103969600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
16	chr12:103969200-103969600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr12:103969200-103969600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
18	chr12:103969200-103969600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr12:103969200-103969600	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
20	chr12:103969200-103969600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
21	chr12:103969200-103969600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr12:103969200-103969600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr12:103969200-103969600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
24	chr12:103969200-103969600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr12:103969200-103969600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr12:103969200-103969600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr12:103969200-103969600	Flanking Active TSS	Liver	Liver
28	chr12:103969200-103969600	Active TSS	Brain Angular Gyrus	brain
29	chr12:103969200-103969600	Active TSS	Brain Anterior Caudate	brain
30	chr12:103969200-103969600	Flanking Active TSS	Brain Germinal Matrix	brain
31	chr12:103969200-103969600	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
32	chr12:103969200-103969600	Flanking Active TSS	Duodenum Mucosa	Duodenum
33	chr12:103969200-103969600	Enhancers	Fetal Brain Male	brain
34	chr12:103969200-103969600	Active TSS	Fetal Brain Female	brain
35	chr12:103969200-103969600	Active TSS	Fetal Heart	heart
36	chr12:103969200-103969600	Flanking Active TSS	Fetal Intestine Large	intestine
37	chr12:103969200-103969600	Active TSS	Pancreatic Islets	Pancreatic Islet
38	chr12:103969200-103969600	Flanking Active TSS	Fetal Muscle Leg	muscle
39	chr12:103969200-103969600	Enhancers	Gastric	stomach
40	chr12:103969200-103969600	Flanking Active TSS	Ovary	ovary
41	chr12:103969200-103969600	Active TSS	Rectal Smooth Muscle	rectum
42	chr12:103969200-103969600	Active TSS	Right Atrium	heart
43	chr12:103969200-103969600	Flanking Active TSS	HMEC	breast
44	chr12:103969200-103969600	Active TSS	K562	blood
45	chr12:103969200-103969600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
46	chr12:103969200-103969600	Active TSS	NH-A	brain
47	chr12:103969200-103969800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr12:103969200-103969800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
49	chr12:103969200-103969800	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
50	chr12:103969200-103969800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood

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