Variant report

Variant rs11837378
Chromosome Location chr12:31225947-31225948
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:31225200-31226200 Flanking Active TSS Dnd41 blood
2 chr12:31225200-31228000 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr12:31225200-31228400 Active TSS HUES6 Cell Line embryonic stem cell
4 chr12:31225200-31228600 Active TSS iPS-20b Cell Line embryonic stem cell
5 chr12:31225400-31226000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
6 chr12:31225400-31226000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr12:31225400-31226000 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr12:31225400-31226000 Enhancers Fetal Muscle Leg muscle
9 chr12:31225400-31226000 Enhancers Fetal Stomach stomach
10 chr12:31225400-31226200 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr12:31225400-31226200 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr12:31225400-31226200 Enhancers Cortex derived primary cultured neurospheres brain
13 chr12:31225400-31226200 Flanking Active TSS Hela-S3 cervix
14 chr12:31225400-31226400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr12:31225400-31226400 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr12:31225400-31226400 Enhancers Lung lung
17 chr12:31225400-31227200 Active TSS Primary hematopoietic stem cells short term culture blood
18 chr12:31225400-31227400 Active TSS Thymus Thymus
19 chr12:31225400-31227800 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr12:31225400-31228000 Active TSS HUES48 Cell Line embryonic stem cell
21 chr12:31225400-31228000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
22 chr12:31225400-31228200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr12:31225400-31228200 Active TSS HUES64 Cell Line embryonic stem cell
24 chr12:31225600-31226000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
25 chr12:31225600-31226000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
26 chr12:31225600-31226000 Enhancers Primary T helper cells PMA-I stimulated --
27 chr12:31225600-31226000 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr12:31225600-31226000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
29 chr12:31225600-31226000 Enhancers Brain Anterior Caudate brain
30 chr12:31225600-31226000 Enhancers Fetal Heart heart
31 chr12:31225600-31226000 Enhancers Fetal Lung lung
32 chr12:31225600-31226000 Weak transcription Pancreas Pancrea
33 chr12:31225600-31226000 Enhancers Rectal Mucosa Donor 29 rectum
34 chr12:31225600-31226000 Flanking Active TSS HepG2 liver
35 chr12:31225600-31226200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr12:31225600-31226200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr12:31225600-31226200 Enhancers Primary neutrophils fromperipheralblood blood
38 chr12:31225600-31226200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr12:31225600-31226200 Flanking Active TSS K562 blood
40 chr12:31225600-31226400 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr12:31225600-31227000 Active TSS Skeletal Muscle Female skeletal muscle
42 chr12:31225600-31227400 Active TSS Primary T cells from cord blood blood
43 chr12:31225600-31228000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr12:31225600-31228000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
45 chr12:31225600-31228400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr12:31225600-31229000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr12:31225800-31226000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr12:31225800-31226000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr12:31225800-31226000 Flanking Active TSS Fetal Intestine Large intestine
50 chr12:31225800-31226000 Active TSS HMEC breast

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