Variant report

Variant rs7957798
Chromosome Location chr12:31259365-31259366
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:31227800-31266400 Weak transcription HSMMtube muscle
2 chr12:31228000-31269800 Weak transcription Rectal Smooth Muscle rectum
3 chr12:31228200-31261800 Weak transcription Brain Substantia Nigra brain
4 chr12:31228400-31259800 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr12:31233400-31259800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr12:31233800-31260800 Weak transcription Muscle Satellite Cultured Cells --
7 chr12:31238600-31261000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr12:31242600-31259800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr12:31242600-31270200 Weak transcription GM12878-XiMat blood
10 chr12:31242800-31260000 Weak transcription Left Ventricle heart
11 chr12:31242800-31270200 Weak transcription Primary B cells from cord blood blood
12 chr12:31243000-31259800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr12:31245200-31262200 Weak transcription Brain Inferior Temporal Lobe brain
14 chr12:31249800-31260000 Weak transcription Brain Angular Gyrus brain
15 chr12:31249800-31269800 Weak transcription Primary T cells from cord blood blood
16 chr12:31250000-31260600 Weak transcription Placenta Amnion Placenta Amnion
17 chr12:31250400-31260000 Weak transcription Ovary ovary
18 chr12:31253000-31259400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr12:31253200-31259800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr12:31253600-31259600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr12:31253600-31259600 Strong transcription Fetal Brain Female brain
22 chr12:31253600-31259600 Strong transcription Fetal Stomach stomach
23 chr12:31253600-31259600 Strong transcription Thymus Thymus
24 chr12:31254600-31265800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr12:31255800-31259600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr12:31255800-31259600 Weak transcription NHLF lung
27 chr12:31256000-31269800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr12:31256200-31259600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr12:31256200-31259800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr12:31256200-31270000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr12:31256800-31260400 Weak transcription Brain Anterior Caudate brain
32 chr12:31257000-31266200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr12:31257200-31260800 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr12:31257200-31261800 Weak transcription Gastric stomach
35 chr12:31257200-31262600 Weak transcription Fetal Intestine Large intestine
36 chr12:31257200-31269600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr12:31257200-31270000 Weak transcription Pancreas Pancrea
38 chr12:31257400-31259800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr12:31257600-31259400 Strong transcription Fetal Muscle Trunk muscle
40 chr12:31257600-31260600 Weak transcription H9 Cell Line embryonic stem cell
41 chr12:31257600-31261200 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr12:31257600-31262000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr12:31257600-31262600 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr12:31257600-31262600 Weak transcription HepG2 liver
45 chr12:31257600-31268400 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr12:31257600-31269000 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr12:31257600-31270200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr12:31257800-31260000 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr12:31257800-31260400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr12:31257800-31261400 Weak transcription H1 Cell Line embryonic stem cell

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