Variant report

Variant	rs11844559
Chromosome Location	chr14:71163052-71163053
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10144432	0.94[CEU][hapmap];0.83[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10150936	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11158876	0.86[ASN][1000 genomes]
rs12590136	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17108384	0.88[ASN][1000 genomes]
rs7144585	0.91[ASN][1000 genomes]
rs9323545	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9323546	0.94[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71133200-71173000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71143000-71177800	Weak transcription	Primary B cells from cord blood	blood
3	chr14:71153400-71165200	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr14:71154400-71165000	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr14:71154600-71165000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr14:71154600-71165200	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr14:71160200-71163800	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr14:71160200-71164600	Weak transcription	Placenta	Placenta
9	chr14:71162800-71169800	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr14:71163000-71163200	Enhancers	Duodenum Mucosa	Duodenum
11	chr14:71163000-71164000	Weak transcription	Stomach Mucosa	stomach
12	chr14:71163000-71164600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr14:71163000-71165200	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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