Variant report

Variant	rs17108384
Chromosome Location	chr14:71159023-71159024
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10144432	0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs10148050	0.87[AMR][1000 genomes]
rs10150936	1.00[ASW][hapmap];0.85[CHB][hapmap];0.87[CHD][hapmap];0.84[JPT][hapmap];0.87[YRI][hapmap];0.83[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs11844559	0.85[CHB][hapmap];0.85[YRI][hapmap];0.88[ASN][1000 genomes]
rs12590136	0.86[ASN][1000 genomes]
rs28509237	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs58483706	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7144585	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9323545	0.90[ASN][1000 genomes]
rs9323546	0.85[CHB][hapmap];0.90[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71133200-71173000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71141000-71160800	Weak transcription	Primary T cells from cord blood	blood
3	chr14:71143000-71177800	Weak transcription	Primary B cells from cord blood	blood
4	chr14:71153400-71165200	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr14:71154400-71165000	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr14:71154600-71165000	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr14:71154600-71165200	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr14:71157600-71162400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr14:71158400-71160000	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr14:71158400-71160200	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr14:71158600-71159200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:71158600-71160200	Enhancers	Placenta	Placenta
13	chr14:71159000-71159200	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr14:71159000-71159400	Enhancers	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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