Variant report

Variant	rs11850806
Chromosome Location	chr14:78669137-78669138
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10133423	0.92[AFR][1000 genomes]
rs10141650	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59597870	0.81[ASN][1000 genomes]
rs61106716	1.00[ASN][1000 genomes]
rs61636440	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1366	chr14:78633044-78677718	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78665000-78678000	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr14:78665400-78670000	Enhancers	Fetal Thymus	thymus
3	chr14:78666000-78670200	Enhancers	Thymus	Thymus
4	chr14:78666800-78669200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr14:78667200-78670200	Enhancers	Primary hematopoietic stem cells	blood
6	chr14:78667400-78670200	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr14:78667600-78669600	Enhancers	Primary B cells from peripheral blood	blood
8	chr14:78667600-78669800	Enhancers	Primary B cells from cord blood	blood
9	chr14:78667600-78670200	Enhancers	Dnd41	blood
10	chr14:78667800-78669600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
11	chr14:78667800-78670200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:78668000-78670200	Enhancers	Primary T cells from cord blood	blood
13	chr14:78668200-78669200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
14	chr14:78668400-78669200	Enhancers	Primary T cells fromperipheralblood	blood
15	chr14:78668400-78669800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr14:78668400-78670600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr14:78668600-78670000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr14:78668600-78670000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr14:78668600-78670600	Enhancers	NHEK	skin
20	chr14:78668800-78669200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
21	chr14:78668800-78669400	Enhancers	Brain Germinal Matrix	brain
22	chr14:78669000-78670000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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